PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG063080.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 179aa MW: 18913.5 Da PI: 10.9892 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 72.9 | 5.5e-23 | 61 | 108 | 1 | 48 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 +CqvegC++ l+ akeyhrrhkvCe+hskap v+v+g eqrfCqqCsr TRIDC2BG063080.3 61 RCQVEGCHMVLAGAKEYHRRHKVCEAHSKAPRVIVHGAEQRFCQQCSR 108 6**********************************************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 179 aa Download sequence |
SQQQHMQQEL TSLKLGKRPS NLAGGQVAQM DGSGVGGGRA VVEGKRKEKA AGATATAAMP 60 RCQVEGCHMV LAGAKEYHRR HKVCEAHSKA PRVIVHGAEQ RFCQQCSRRT YVRAESLSRA 120 SVDSLVCVYM RAASTRWRSS TTPSGAAGGG LPATTSGAGR ATPATPWPGA LRTHTVIHV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G43270.1 | 2e-21 | SBP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG063080.3 |