PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG062210.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 573aa MW: 62678.9 Da PI: 4.9729

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG062210.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	7.9e-13	391	438	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f L++l+P+ K++Ka+iL +++ Y+++L+ TRIDC2BG062210.1 391 KNHVISERRRREKLNEMFLILKSLVPSiH------KVDKASILAETIAYLRELE 438 6899*********************66......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence
MHMKERNSVV MALSVVRPSQ EEPTLPPAGK QFSNQLAAAV RSTNWSYAIF WSISTSRPGV 60 LTWKDGFYNG EIKTRKVTSS ADLSADQLVL QRSEQLRELY ESLLSGQCDH RARRPAAALS 120 PEDLGDAEWY YTVCMSYAFR PGQGLPGRSF ASNEHVWLCN AQCADTKTFQ RALLAKTASI 180 QTVACIPLMG GVLELGTTNT VLEDRDMVNR INTSFWDLKF PTSEEPNSSP SADDTGDADI 240 VFEDLNHESI AAIIPGELEL GEVECLSDGN LERIMKEING FYGLCDELDV GALEENWIMG 300 GSLEVMSASE VSMAPAATDG ITDGAVTFSS VEPSRSSCFT AWKRSLDSTE DVDTSVAGES 360 QKLLKKVLAG GAWANNGGDG TARAQESTNT KNHVISERRR REKLNEMFLI LKSLVPSIHK 420 VDKASILAET IAYLRELEQK VEELESNRAA ATAVRKLHDV SGKKVLAGSK RKASELGGDD 480 ADRVLSKEDV PSNVVNVTVT EKEVLLEVQC RWKELLMTQV FDAIKSLRLG VLSVRASTPD 540 GLLALKIRAQ FAGPAAVEPG MISEALQRAI RRR

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence

MHMKERNSVV MALSVVRPSQ EEPTLPPAGK QFSNQLAAAV RSTNWSYAIF WSISTSRPGV  60
LTWKDGFYNG EIKTRKVTSS ADLSADQLVL QRSEQLRELY ESLLSGQCDH RARRPAAALS  120
PEDLGDAEWY YTVCMSYAFR PGQGLPGRSF ASNEHVWLCN AQCADTKTFQ RALLAKTASI  180
QTVACIPLMG GVLELGTTNT VLEDRDMVNR INTSFWDLKF PTSEEPNSSP SADDTGDADI  240
VFEDLNHESI AAIIPGELEL GEVECLSDGN LERIMKEING FYGLCDELDV GALEENWIMG  300
GSLEVMSASE VSMAPAATDG ITDGAVTFSS VEPSRSSCFT AWKRSLDSTE DVDTSVAGES  360
QKLLKKVLAG GAWANNGGDG TARAQESTNT KNHVISERRR REKLNEMFLI LKSLVPSIHK  420
VDKASILAET IAYLRELEQK VEELESNRAA ATAVRKLHDV SGKKVLAGSK RKASELGGDD  480
ADRVLSKEDV PSNVVNVTVT EKEVLLEVQC RWKELLMTQV FDAIKSLRLG VLSVRASTPD  540
GLLALKIRAQ FAGPAAVEPG MISEALQRAI RRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	397	402	ERRRRE
2	398	403	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	2e-82	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG062210.1