PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG061420.4
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 190aa    MW: 21803.2 Da    PI: 8.4795
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG061420.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.86.6e-2699148352
            RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RWPhRkiksl
  TRIDC2BG061420.4  99 ASITLVDIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRWPHRKIKSL 148
                       78**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
LPPMPPPMLC PFRNPSLVFV PSLYNDLYMV FQFQKFQQAP ELVKRDSDEK STRLDAEDKT  60
CDVEVKEESG SDSDEDPQSG EELPAHAERR RRAKKQHIAS ITLVDIAPYF HLPIREASRA  120
LKIGVSILKQ KCRQYGIPRW PHRKIKSLDS LISDLEVNLA APSVPLRLII YLFRKHSCAT  180
FGCSLQQWIM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.14e-25Nin-like family protein