PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG061420.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Nin-like | ||||||||
Protein Properties | Length: 190aa MW: 21803.2 Da PI: 8.4795 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 81.8 | 6.6e-26 | 99 | 148 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RWPhRkiksl TRIDC2BG061420.4 99 ASITLVDIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRWPHRKIKSL 148 78**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
LPPMPPPMLC PFRNPSLVFV PSLYNDLYMV FQFQKFQQAP ELVKRDSDEK STRLDAEDKT 60 CDVEVKEESG SDSDEDPQSG EELPAHAERR RRAKKQHIAS ITLVDIAPYF HLPIREASRA 120 LKIGVSILKQ KCRQYGIPRW PHRKIKSLDS LISDLEVNLA APSVPLRLII YLFRKHSCAT 180 FGCSLQQWIM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 4e-25 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG061420.4 |