PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG061420.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 344aa MW: 39208.1 Da PI: 9.3439 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 80.5 | 1.8e-25 | 203 | 252 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RWPhRkiksl TRIDC2BG061420.3 203 ASITLVDIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRWPHRKIKSL 252 78**********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 344 aa Download sequence |
MDAAAAAAVT TLSALAVFAS TLHQGAVRSV HGYRVVAMGG RCAWDRWVER EFAFSPTSCR 60 EVPLPAAAPR ILPVEWRGRP AYREGQVLGA WRCILAFDSI AAVPLPPMPP PMLCPFRNPS 120 LVFVPSLYND LYMVFQFQKF QQAPELVKRD SDEKSTRLDA EDKTCDVEVK EESGSDSDED 180 PQSGEELPAH AERRRRAKKQ HIASITLVDI APYFHLPIRE ASRALKIGVS ILKQKCRQYG 240 IPRWPHRKIK SLDSLISDLE FVMDDTDGDV VQKETRRQRE KEKEEKEKEK QEAIRALAKR 300 KRLLESEKEI IQQKPALDLM AETKLFREDV FKRRYRAKRL PAGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G35590.1 | 9e-42 | Nin-like family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG061420.3 |