PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG059050.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 262aa MW: 29320.8 Da PI: 4.9561 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.8 | 1e-19 | 62 | 115 | 4 | 56 |
-SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ft+eq++ Le++F+ + ++ +e++eLA++lgL+ rqV +WFqN+Ra+++ TRIDC2BG059050.2 62 KRRFTEEQIRSLESMFHAhHAKLEPREKAELARELGLQPRQVAIWFQNKRARWR 115 458**************9899********************************9 PP | |||||||
2 | HD-ZIP_I/II | 124.7 | 4.3e-40 | 60 | 153 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 e+krr+++eq+++LE++F++++ kLep++K+elareLglqprqva+WFqn+RAR+++kqlE+d++aL++ ydal+++ e+L++e+ +L+++l+ TRIDC2BG059050.2 60 ERKRRFTEEQIRSLESMFHAHHaKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEHDFAALRADYDALHSRVESLKQEKLALAAQLH 152 69******************999*******************************************************************998 PP HD-ZIP_I/II 93 e 93 e TRIDC2BG059050.2 153 E 153 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MDYHQQHQQQ HQFLMPPPAS LPAQQQQLCA PMMGIDMDMD MDMDEQLCFM GRGGVGRGAE 60 RKRRFTEEQI RSLESMFHAH HAKLEPREKA ELARELGLQP RQVAIWFQNK RARWRSKQLE 120 HDFAALRADY DALHSRVESL KQEKLALAAQ LHELSERLRQ RDGGSGGAAT ATASSSSCNG 180 GGQELDDDKR NVVAGCVDVE PPESCVLGGT TCATPADVSV SVESECDDHL HYDGAVFPES 240 FCATPELWEP WPWPPVEWNA VA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.2 | 6e-30 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG059050.2 |