PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG059050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HB-other | ||||||||
Protein Properties | Length: 97aa MW: 11278.9 Da PI: 6.2255 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.6 | 8.5e-08 | 61 | 97 | 3 | 38 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCT CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkklg 38 ++++ft+eq++ Le++F+ + ++ +e++eLA++lg TRIDC2BG059050.1 61 RKRRFTEEQIRSLESMFHAhHAKLEPREKAELARELG 97 4558**************9899************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence |
MDYHQQHQQQ HQFLMPPPAS LPAQQQQLCA PMMGIDMDMD MDMDEQLCFM GRGGVGRGAE 60 RKRRFTEEQI RSLESMFHAH HAKLEPREKA ELARELG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.2 | 4e-08 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG059050.1 |