PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG059000.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 745aa    MW: 81161.2 Da    PI: 6.4419
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG059000.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix100.91e-3192176187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+++e+laLi++r+em++++r++ lk+plWeevs+k++e g++rs+k+Ckek+en++k+yk++keg+ +r++++s  +++f++lea
  TRIDC2BG059000.4  92 RWPREETLALIRIRSEMDTTFRDATLKGPLWEEVSRKLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YRFFQELEA 176
                       8*********************************************************************866665..******985 PP
2trihelix109.71.9e-34495580187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+k ev+aLi++r +m++r++++  k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+qlea
  TRIDC2BG059000.4 495 RWPKTEVHALIQLRMDMDNRYQENGPKGPLWEEISAGMRRLGYSRNSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLEA 580
                       8********************************************************************97.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 745 aa     Download sequence    
MQQQHQHHHQ GGGSQYGAPP PADMGPFSAQ PAPGPVPLSV RPPPTQQQQP QPSYEQELAA  60
ASGAGGSSFP DDDMLGDSGG HSAGGLGSGG NRWPREETLA LIRIRSEMDT TFRDATLKGP  120
LWEEVSRKLA ELGYKRSAKK CKEKFENVHK YYKRTKEGRA GRQDGKSYRF FQELEALHAA  180
TAAAQHQQQE HLPLVVSAAP PPQMHAFSAP QPMSAMPPPP GPMQPAPISS AAPAPVVEPP  240
QPLPVSLQGL SFPSMSDSES DDDDDSEDDD MTAETGGSPD GLGKRKRGGG GSKKMMAFFE  300
GLMKQVVQRQ EEMQQRFLET MEKREAERTE REEAWRRQEV ARLNREQEQL AQERAAAASR  360
DASIIAFLQR IGGQTVHVPP VVIPMPTPMQ VQTPPPPKKP RQHLPPPPPS QATQQPQPQP  420
QPQPIPAAPL QQQPPPQPPQ HKETTREEAG TPRSAPAPTS AGLSLALVPV ATEQHVVEAA  480
GLGGGESGGG PSSSRWPKTE VHALIQLRMD MDNRYQENGP KGPLWEEISA GMRRLGYSRN  540
SKRCKEKWEN INKYFKKVKE SNKRRPEDSK TCPYFHQLEA IYRKKHNGSG SSGAAANNAV  600
VSVPAVAEHQ NLNRHEIEIE GKKINDTDKR NNGGVGAAQV PTSNGQTTPT TATFDLGVKK  660
PEDAVRELNE QPHREFTTDE TDSDDMGDDY TDDGEDGEDD GKMQYRIQFQ RPNPVGTNNA  720
PPPPTTAATA APTSTPASSF LAMVQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135143KRSAKKCKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.14e-48Trihelix family protein