PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG059000.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 661aa MW: 72791.6 Da PI: 6.9658

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG059000.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.3	4.6e-14	44	92	37	87
trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 k++e g++rs+k+Ckek+en++k+yk++keg+ +r++++s +++f++lea TRIDC2BG059000.3 44 KLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKS--YRFFQELEA 92 46899***************************866665..****985 PP
2	trihelix	109.9	1.6e-34	411	496	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r +m++r++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+qlea TRIDC2BG059000.3 411 RWPKTEVHALIQLRMDMDNRYQENGPKGPLWEEISAGMRRLGYSRNSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLEA 496 8******************************************************************97.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
FPFCLYASFL ALSLVLPSPC LFRRPGEEEK EKTHTRSFFF LLLKLAELGY KRSAKKCKEK 60 FENVHKYYKR TKEGRAGRQD GKSYRFFQEL EALHAATAAA QHQQQEHLPL VVSAAPPPQM 120 HAFSAPQPMS AMPPPPGPMQ PAPISSAAPA PVVEPPQPLP VSLQGLSFPS MSDSESDDDD 180 DSEDDDMTAE TGGSPDGLGK RKRGGGGSKK MMAFFEGLMK QVVQRQEEMQ QRFLETMEKR 240 EAERTEREEA WRRQEVARLN REQEQLAQER AAAASRDASI IAFLQRIGGQ TVHVPPVVIP 300 MPTPMQVQTP PPPKKPRQHL PPPPPSQATQ QPQPQPQPQP IPAAPLQQQP PPQPPQHKET 360 TREEAGTPRS APAPTSAGLS LALVPVATEQ HVVEAAGLGG GESGGGPSSS RWPKTEVHAL 420 IQLRMDMDNR YQENGPKGPL WEEISAGMRR LGYSRNSKRC KEKWENINKY FKKVKESNKR 480 RPEDSKTCPY FHQLEAIYRK KHNGSGSSGA AANNAVVSVP AVAEHQNLNR HEIEIEGKKI 540 NDTDKRNNGG VGAAQVPTSN GQTTPTTATF DLGVKKPEDA VRELNEQPHR EFTTDETDSD 600 DMGDDYTDDG EDGEDDGKMQ YRIQFQRPNP VGTNNAPPPP TTAATAAPTS TPASSFLAMV 660 Q

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

FPFCLYASFL ALSLVLPSPC LFRRPGEEEK EKTHTRSFFF LLLKLAELGY KRSAKKCKEK  60
FENVHKYYKR TKEGRAGRQD GKSYRFFQEL EALHAATAAA QHQQQEHLPL VVSAAPPPQM  120
HAFSAPQPMS AMPPPPGPMQ PAPISSAAPA PVVEPPQPLP VSLQGLSFPS MSDSESDDDD  180
DSEDDDMTAE TGGSPDGLGK RKRGGGGSKK MMAFFEGLMK QVVQRQEEMQ QRFLETMEKR  240
EAERTEREEA WRRQEVARLN REQEQLAQER AAAASRDASI IAFLQRIGGQ TVHVPPVVIP  300
MPTPMQVQTP PPPKKPRQHL PPPPPSQATQ QPQPQPQPQP IPAAPLQQQP PPQPPQHKET  360
TREEAGTPRS APAPTSAGLS LALVPVATEQ HVVEAAGLGG GESGGGPSSS RWPKTEVHAL  420
IQLRMDMDNR YQENGPKGPL WEEISAGMRR LGYSRNSKRC KEKWENINKY FKKVKESNKR  480
RPEDSKTCPY FHQLEAIYRK KHNGSGSSGA AANNAVVSVP AVAEHQNLNR HEIEIEGKKI  540
NDTDKRNNGG VGAAQVPTSN GQTTPTTATF DLGVKKPEDA VRELNEQPHR EFTTDETDSD  600
DMGDDYTDDG EDGEDDGKMQ YRIQFQRPNP VGTNNAPPPP TTAATAAPTS TPASSFLAMV  660
Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	51	59	KRSAKKCKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-48	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG059000.3