PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG059000.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 442aa MW: 48335.2 Da PI: 8.9937

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG059000.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	110.8	8.6e-35	274	359	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r +m++r++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+qlea TRIDC2BG059000.2 274 RWPKTEVHALIQLRMDMDNRYQENGPKGPLWEEISAGMRRLGYSRNSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLEA 359 8******************************************************************97.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
PMQPAPISSA APAPVVEPPQ PLPVSLQGLS FPSMSDSESD DDDDSEDDDM TAETGGSPDG 60 LGKRKRGGGG SKKMMAFFEG LMKQVVQRQE EMQQRFLETM EKREAERTER EEAWRRQEVA 120 RLNREQEQLA QERAAAASRD ASIIAFLQRI GGQTVHVPPV VIPMPTPMQV QTPPPPKKPR 180 QHLPPPPPSQ ATQQPQPQPQ PQPIPAAPLQ QQPPPQPPQH KETTREEAGT PRSAPAPTSA 240 GLSLALVPVA TEQHVVEAAG LGGGESGGGP SSSRWPKTEV HALIQLRMDM DNRYQENGPK 300 GPLWEEISAG MRRLGYSRNS KRCKEKWENI NKYFKKVKES NKRRPEDSKT CPYFHQLEAI 360 YRKKHNGSGS SGAAANNAVV SVPAVAEHQN LNRHEIEIEG KKINDTDKRN NGGVGAAQVP 420 TSNGQTTPTT ATFDLGVKKK TL

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

PMQPAPISSA APAPVVEPPQ PLPVSLQGLS FPSMSDSESD DDDDSEDDDM TAETGGSPDG  60
LGKRKRGGGG SKKMMAFFEG LMKQVVQRQE EMQQRFLETM EKREAERTER EEAWRRQEVA  120
RLNREQEQLA QERAAAASRD ASIIAFLQRI GGQTVHVPPV VIPMPTPMQV QTPPPPKKPR  180
QHLPPPPPSQ ATQQPQPQPQ PQPIPAAPLQ QQPPPQPPQH KETTREEAGT PRSAPAPTSA  240
GLSLALVPVA TEQHVVEAAG LGGGESGGGP SSSRWPKTEV HALIQLRMDM DNRYQENGPK  300
GPLWEEISAG MRRLGYSRNS KRCKEKWENI NKYFKKVKES NKRRPEDSKT CPYFHQLEAI  360
YRKKHNGSGS SGAAANNAVV SVPAVAEHQN LNRHEIEIEG KKINDTDKRN NGGVGAAQVP  420
TSNGQTTPTT ATFDLGVKKK TL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-50	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG059000.2