PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG058420.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 105aa    MW: 11191.6 Da    PI: 10.3661
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG058420.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY37.39.6e-124510580134
             YABBY  80 enlksnvekeesastsvssekl......senedeevprvppvirPPekrqrvPsaynrfik 134
                       +  + + +++++a ++ +++++       + e ++ + +    + PekrqrvPsaynrfik
  TRIDC2BG058420.4  45 NVSSITSSSNSCAINTPAMSMMpppekpAQREPQQRKSAASGTKHPEKRQRVPSAYNRFIK 105
                       3333333444445555555555777654333333344455679*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
ATANQLPFSP SLLSPTSPAS PHGLLDEMSS FQAPSSLLTD QASPNVSSIT SSSNSCAINT  60
PAMSMMPPPE KPAQREPQQR KSAASGTKHP EKRQRVPSAY NRFIK