PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG058420.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 280aa    MW: 30116.2 Da    PI: 7.2223
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG058420.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY202.81.4e-62392315170
             YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas.....qllaaeshldeslkee...................... 70 
                          eq+Cyv+CnfC+tilav vP +slfk+v+vrCGhC++llsvnl++       ++l+ +         +                      
  TRIDC2BG058420.2  39 AEQEQLCYVHCNFCDTILAVGVPCSSLFKTVAVRCGHCANLLSVNLRNLLlpataNQLPFSP--------Sllsptspasphglldemssfqa 123
                       6789*****************************************99876333333333333........23333555688898888888876 PP

             YABBY  71 ...lleelkveeenlksnvekeesastsvssekl......senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafs 154
                          l  +++ + +  + + +++++a ++ +++++       + e ++ + +    + PekrqrvPsaynrfik+eiqrika+nPdi+hreafs
  TRIDC2BG058420.2 124 pssL-LTDQASPNVSSITSSSNSCAINTPAMSMMpppekpAQREPQQRKSAASGTKHPEKRQRVPSAYNRFIKDEIQRIKANNPDITHREAFS 215
                       6632.23333333333334444455555555566888665333333444455679************************************** PP

             YABBY 155 aaaknWahfPkihfgl 170
                       aaaknWahfP+ihfgl
  TRIDC2BG058420.2 216 AAAKNWAHFPHIHFGL 231
                       **************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MRDAALLVAS TMMSSPAESE TSFFPDHLAE QQQQQPPFAE QEQLCYVHCN FCDTILAVGV  60
PCSSLFKTVA VRCGHCANLL SVNLRNLLLP ATANQLPFSP SLLSPTSPAS PHGLLDEMSS  120
FQAPSSLLTD QASPNVSSIT SSSNSCAINT PAMSMMPPPE KPAQREPQQR KSAASGTKHP  180
EKRQRVPSAY NRFIKDEIQR IKANNPDITH REAFSAAAKN WAHFPHIHFG LMPDQGLMRK  240
TSIQSQLDGA GDCMLFKDSL YAAAAAAAAT AASSMGATPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.12e-49YABBY family protein