PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG057660.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 708aa MW: 76179.6 Da PI: 6.8433

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG057660.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.3	1.3e-22	127	228	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+lt+sd+++ g +++p+ +ae++ ++++ + + ++d +g ++++++iyr++++r++lt+GW++Fv++++L +gD++vF + TRIDC2BG057660.2 127 FAKTLTQSDANNGGGFSVPRFCAETIfppldysSEPPVQ--NIFVKDVHGDEFKFRHIYRGTPRRHLLTTGWSNFVNQKKLLAGDSIVFL--R 215 89*******************999986555555..6********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 ++++ +v+++r+ TRIDC2BG057660.2 216 SEGGDVHVGIRRA 228 588999**996 PP
2	Auxin_resp	118.1	7.4e-39	272	355	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+t+++FevvY+Prast+eF+v++ v++a++v++++GmRfkmafetedss++++ +Gtv+g++++dp+rWp+S+Wr+L+ TRIDC2BG057660.2 272 AARMAATGQPFEVVYYPRASTPEFCVRAGAVRAAMQVQWCPGMRFKMAFETEDSSRISWfMGTVAGIHAADPSRWPQSPWRLLQ 355 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MLTFTELSCP AGGGGGGEDA PRSVDSQLWL ACAGSMCTVP PVGAAVYYFP QGHAEQAAGA 60 VDLSAARVPA LLPCRVSAVR FMADPHSDEV FAKIRLVPLR QGDPAVDVGD AAAEGRAQDD 120 RPKPASFAKT LTQSDANNGG GFSVPRFCAE TIFPPLDYSS EPPVQNIFVK DVHGDEFKFR 180 HIYRGTPRRH LLTTGWSNFV NQKKLLAGDS IVFLRSEGGD VHVGIRRAKR VFCDEGHSGW 240 DHYRGLMRGN ASSGDGGASA KGKVPAEDVV AAARMAATGQ PFEVVYYPRA STPEFCVRAG 300 AVRAAMQVQW CPGMRFKMAF ETEDSSRISW FMGTVAGIHA ADPSRWPQSP WRLLQVTWDE 360 PELLQNVKRV CPWLVELVSS MPNLHLPSFS PPRKKPRIPS YADFPFEGQL FHPPPPPFPP 420 NHHHHHQQDQ LLHHSFPFFP FPDSNGAPLA GIQGARHAQF GPSFSDLHLS NLQSSLLYAG 480 GVRRPAADHV APRAPRTIST DLTIGTSPAR EDDNITTRAP TKKKAGDVVK PAPTLLLFGQ 540 AILTEEQMKS SSAGGEAATS PVAGGCGSPN WDAEKAPNLS EGSGSGSGVI QGSPSNNNTS 600 SWRLQWFGDS SGQAAPELGL EPGQCKVFVE SDAVGRNLDL SALGSFEELY SRMSEMFGME 660 CAELRNHVLY RSAAGEVKHI GDEPFSAFVK SARRLTILTD AGSDNIGG

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MLTFTELSCP AGGGGGGEDA PRSVDSQLWL ACAGSMCTVP PVGAAVYYFP QGHAEQAAGA  60
VDLSAARVPA LLPCRVSAVR FMADPHSDEV FAKIRLVPLR QGDPAVDVGD AAAEGRAQDD  120
RPKPASFAKT LTQSDANNGG GFSVPRFCAE TIFPPLDYSS EPPVQNIFVK DVHGDEFKFR  180
HIYRGTPRRH LLTTGWSNFV NQKKLLAGDS IVFLRSEGGD VHVGIRRAKR VFCDEGHSGW  240
DHYRGLMRGN ASSGDGGASA KGKVPAEDVV AAARMAATGQ PFEVVYYPRA STPEFCVRAG  300
AVRAAMQVQW CPGMRFKMAF ETEDSSRISW FMGTVAGIHA ADPSRWPQSP WRLLQVTWDE  360
PELLQNVKRV CPWLVELVSS MPNLHLPSFS PPRKKPRIPS YADFPFEGQL FHPPPPPFPP  420
NHHHHHQQDQ LLHHSFPFFP FPDSNGAPLA GIQGARHAQF GPSFSDLHLS NLQSSLLYAG  480
GVRRPAADHV APRAPRTIST DLTIGTSPAR EDDNITTRAP TKKKAGDVVK PAPTLLLFGQ  540
AILTEEQMKS SSAGGEAATS PVAGGCGSPN WDAEKAPNLS EGSGSGSGVI QGSPSNNNTS  600
SWRLQWFGDS SGQAAPELGL EPGQCKVFVE SDAVGRNLDL SALGSFEELY SRMSEMFGME  660
CAELRNHVLY RSAAGEVKHI GDEPFSAFVK SARRLTILTD AGSDNIGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG057660.2