PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG055710.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 220aa    MW: 24708 Da    PI: 8.5977
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG055710.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.42.9e-174993147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg++T++E+  +v+++ ++G++ W+tIar ++ gRt++++k++w+++
  TRIDC2BG055710.4 49 RGKMTPQEESTIVQLHSLWGNR-WSTIARSLP-GRTDNEIKNYWRTH 93
                      89********************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
TMRSTSSVSS IQACIGVNPR PANMLKCLKR SGKSCRLRWV NYLRPDLKRG KMTPQEESTI  60
VQLHSLWGNR WSTIARSLPG RTDNEIKNYW RTHYKKGKPS KNIERARARF LMQRREMQQQ  120
QQQQKLLLGQ VKDVELPGAT VSDDVDEKMD RAVGPAATAL ADHGHEELIM QDVLDFLCPM  180
SCALLHSAGQ TGSCGASTSE EYGSTEDDGA TWGSLWNLED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30210.12e-42MYB family protein