PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG055710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 216aa    MW: 24150.3 Da    PI: 8.2204
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG055710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.42.8e-174387147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg++T++E+  +v+++ ++G++ W+tIar ++ gRt++++k++w+++
  TRIDC2BG055710.3 43 RGKMTPQEESTIVQLHSLWGNR-WSTIARSLP-GRTDNEIKNYWRTH 87
                      89********************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
QLCAALAAYP ASRHALGLIQ GLKRSGKSCR LRWVNYLRPD LKRGKMTPQE ESTIVQLHSL  60
WGNRWSTIAR SLPGRTDNEI KNYWRTHYKK GKPSKNIERA RARFLMQRRE MQQQQQQQKL  120
LLGQVKDVEL PGATVSDDVD EKMDRAVGPA ATALADHGHE ELIMQDVLDF LCPMSCALLH  180
SAGQTGSCGA STSEEYGSTE DDGATWGSLW NLEDVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30210.16e-43MYB family protein