PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG055290.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 648aa MW: 68312.7 Da PI: 6.5474

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG055290.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.1	4.5e-13	261	320	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ k++ +g ++ +++Aa+a++ a++k++g TRIDC2BG055290.3 261 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgKQVCVGGYDKEDKAARAYDLAALKYWG 320 57*****************666664478446******99***********98 PP
2	AP2	51.5	2.5e-16	363	414	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC2BG055290.3 363 SKYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFTTEEEAAEAYDIAAIKFRG 414 89**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
SGQGSHPQPH QNGSPAAAAA IDVSGGGDFY GLQGQTAPDA HLGMSGLRAD ANYGVMDAFN 60 GGTQETQDWA MRGLNYHGGS SELSMLVGSS GGRMTVDDGE APKLEDFLGG NSFSDVQDHA 120 GGYLFSSGSA MGSSAAAGSH GVDGRGGSTI ELSMIKTWLR NDNNQAQHDQ EMSADASATS 180 YACSGAPGST GNGVGVASSR GQGLALSMSM GSNSHPQMPV VPAAVGTEST SSENKRVDSP 240 SAGTADAVQR KSIDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT RKGKQVCVGG 300 YDKEDKAARA YDLAALKYWG TTTTTNIPIS TYEKEIEEMK HMTRQEYIAY LRRNSSGFSR 360 GASKYRGVTR HHQQGRWQAR IGRVAGNKDL YLGTFTTEEE AAEAYDIAAI KFRGLNAVTN 420 FEMSRYDVKS ILEGSTLPVG GAARRLKEAA ELAEAGVWRA EDGSIVSHLQ ADAMAGYHHG 480 WPTSIAFGSH QQQQSAAQLA LHYPYGVGGH ARGWCKPEQD AVIAAAHGGQ DIQELHLGSG 540 GSTHNFFQPA SRAAVYGNGG GGAWYQGLGG NAYMMPVGTV VDADQGHSGS TATTEEGRLV 600 GYGAEAGVDP YAAMRRAYEL SQGSSSVSVA KVADGYSNNW SSPFNGMG

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

SGQGSHPQPH QNGSPAAAAA IDVSGGGDFY GLQGQTAPDA HLGMSGLRAD ANYGVMDAFN  60
GGTQETQDWA MRGLNYHGGS SELSMLVGSS GGRMTVDDGE APKLEDFLGG NSFSDVQDHA  120
GGYLFSSGSA MGSSAAAGSH GVDGRGGSTI ELSMIKTWLR NDNNQAQHDQ EMSADASATS  180
YACSGAPGST GNGVGVASSR GQGLALSMSM GSNSHPQMPV VPAAVGTEST SSENKRVDSP  240
SAGTADAVQR KSIDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT RKGKQVCVGG  300
YDKEDKAARA YDLAALKYWG TTTTTNIPIS TYEKEIEEMK HMTRQEYIAY LRRNSSGFSR  360
GASKYRGVTR HHQQGRWQAR IGRVAGNKDL YLGTFTTEEE AAEAYDIAAI KFRGLNAVTN  420
FEMSRYDVKS ILEGSTLPVG GAARRLKEAA ELAEAGVWRA EDGSIVSHLQ ADAMAGYHHG  480
WPTSIAFGSH QQQQSAAQLA LHYPYGVGGH ARGWCKPEQD AVIAAAHGGQ DIQELHLGSG  540
GSTHNFFQPA SRAAVYGNGG GGAWYQGLGG NAYMMPVGTV VDADQGHSGS TATTEEGRLV  600
GYGAEAGVDP YAAMRRAYEL SQGSSSVSVA KVADGYSNNW SSPFNGMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-112	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG055290.3