PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG055290.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 549aa MW: 58414 Da PI: 6.7454 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.4 | 9.7e-15 | 261 | 320 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ k+++lg ++ +++Aa+a++ a++k++g TRIDC2BG055290.2 261 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqtRKgKQVYLGGYDKEDKAARAYDLAALKYWG 320 57*******************666664478446**********99*************98 PP | |||||||
2 | AP2 | 51.8 | 2e-16 | 363 | 414 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC2BG055290.2 363 SKYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFTTEEEAAEAYDIAAIKFRG 414 89****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 549 aa Download sequence |
SGQGSHPQPH QNGSPAAAAA IDVSGGGDFY GLQGQTAPDA HLGMSGLRAD ANYGVMDAFN 60 GGTQETQDWA MRGLNYHGGS SELSMLVGSS GGRMTVDDGE APKLEDFLGG NSFSDVQDHA 120 GGYLFSSGSA MGSSAAAGSH GVDGRGGSTI ELSMIKTWLR NDNNQAQHDQ EMSADASATS 180 YACSGAPGST GNGVGVASSR GQGLALSMSM GSNSHPQMPV VPAAVGTEST SSENKRVDSP 240 SAGTADAVQR KSIDTFGQRT SIYRGVTRHR WTGRYEAHLW DNSCRREGQT RKGKQVYLGG 300 YDKEDKAARA YDLAALKYWG TTTTTNIPIS TYEKEIEEMK HMTRQEYIAY LRRNSSGFSR 360 GASKYRGVTR HHQQGRWQAR IGRVAGNKDL YLGTFTTEEE AAEAYDIAAI KFRGLNAVTN 420 FEMSRYDVKS ILEGSTLPVG GAARRLKEAA ELAEAGVWRA EDGSIVSHLQ ADAMAGYHHG 480 WPTSIAFGSH QQQQSAAQLA LHYPYGVGGH ARGWCKPEQD AVIAAAHGGQ DIQELHLGSG 540 GSTHNFFQP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 1e-115 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG055290.2 |