PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG055290.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 657aa MW: 69303.8 Da PI: 6.5482

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG055290.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.1	6.6e-11	273	329	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g TRIDC2BG055290.1 273 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGKQ-GGYDKEDKAARAYDLAALKYWG 329 57*****************5544.2354448877.6699999***********98 PP
2	AP2	51.5	2.5e-16	372	423	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g TRIDC2BG055290.1 372 SKYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFTTEEEAAEAYDIAAIKFRG 423 89**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MASANNWLGF SLSGQGSHPQ PHQNGSPAAA AAIDVSGGGD FYGLQGQTAP DAHLGMSGLR 60 ADANYGVMDA FNGGTQETQD WAMRGLNYHG GSSELSMLVG SSGGRMTVDD GEAPKLEDFL 120 GGNSFSDVQD HAGGYLFSSG SAMGSSAAAG SHGVDGRGGS TIELSMIKTW LRNDNNQAQH 180 DQEMSADASA TSYACSGAPG STGNGVGVAS SRGQGLALSM SMGSNSHPQM PVVPAAVGTE 240 STSSENKRVD SPSAGTADAV QRKSIDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG 300 QTRKGKQGGY DKEDKAARAY DLAALKYWGT TTTTNIPIST YEKEIEEMKH MTRQEYIAYL 360 RRNSSGFSRG ASKYRGVTRH HQQGRWQARI GRVAGNKDLY LGTFTTEEEA AEAYDIAAIK 420 FRGLNAVTNF EMSRYDVKSI LEGSTLPVGG AARRLKEAAE LAEAGVWRAE DGSIVSHLQA 480 DAMAGYHHGW PTSIAFGSHQ QQQSAAQLAL HYPYGVGGHA RGWCKPEQDA VIAAAHGGQD 540 IQELHLGSGG STHNFFQPAS RAAVYGNGGG GAWYQGLGGN AYMMPVGTVV DADQGHSGST 600 ATTEEGRLVG YGAEAGVDPY AAMRRAYELS QGSSSVSVAK VADGYSNNWS SPFNGMG

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MASANNWLGF SLSGQGSHPQ PHQNGSPAAA AAIDVSGGGD FYGLQGQTAP DAHLGMSGLR  60
ADANYGVMDA FNGGTQETQD WAMRGLNYHG GSSELSMLVG SSGGRMTVDD GEAPKLEDFL  120
GGNSFSDVQD HAGGYLFSSG SAMGSSAAAG SHGVDGRGGS TIELSMIKTW LRNDNNQAQH  180
DQEMSADASA TSYACSGAPG STGNGVGVAS SRGQGLALSM SMGSNSHPQM PVVPAAVGTE  240
STSSENKRVD SPSAGTADAV QRKSIDTFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG  300
QTRKGKQGGY DKEDKAARAY DLAALKYWGT TTTTNIPIST YEKEIEEMKH MTRQEYIAYL  360
RRNSSGFSRG ASKYRGVTRH HQQGRWQARI GRVAGNKDLY LGTFTTEEEA AEAYDIAAIK  420
FRGLNAVTNF EMSRYDVKSI LEGSTLPVGG AARRLKEAAE LAEAGVWRAE DGSIVSHLQA  480
DAMAGYHHGW PTSIAFGSHQ QQQSAAQLAL HYPYGVGGHA RGWCKPEQDA VIAAAHGGQD  540
IQELHLGSGG STHNFFQPAS RAAVYGNGGG GAWYQGLGGN AYMMPVGTVV DADQGHSGST  600
ATTEEGRLVG YGAEAGVDPY AAMRRAYELS QGSSSVSVAK VADGYSNNWS SPFNGMG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	1e-109	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG055290.1