PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG055170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 151aa MW: 17240.9 Da PI: 9.6576 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 53.7 | 6.9e-17 | 40 | 151 | 5 | 109 |
NAM 5 frFhPtdeelvveyLkkkvegkk......leleevikev..diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sgyWk 84 +rF+Ptd+el+ e+L++kv++ + +++i+++ + + +P++Lp v+ + + +fF++ + + +g+rk+r++k + W+ TRIDC2BG055170.1 40 LRFNPTDQELM-EWLEAKVRDGGarsdplI--DKFIPTIevEYGYPHPQQLP-GVTMDGTIKHFFCRPRAFE-SGRRKHRKIKaerndRTAWH 127 69*********.9*******9996665332..33466551166677******.455677888****987765.678888864434455889** PP NAM 85 atgkdkevlskkgelvglkktLvfy 109 +tgk+ ++++ +g+l+g k++Lv+y TRIDC2BG055170.1 128 KTGKSMALKA-NGRLTGWKNILVLY 151 *******999.999*********99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MVVDPVLKGF DLNIAAVDES SPLEGIGLGL YATEFIHKYL RFNPTDQELM EWLEAKVRDG 60 GARSDPLIDK FIPTIEVEYG YPHPQQLPGV TMDGTIKHFF CRPRAFESGR RKHRKIKAER 120 NDRTAWHKTG KSMALKANGR LTGWKNILVL Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 6e-35 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG055170.1 |