PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG054780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 104aa MW: 12059.9 Da PI: 9.0947 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 24.2 | 1.1e-07 | 41 | 98 | 1 | 68 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkv 68 +fYn Y+ e+GF vr +ks+ + r + +++ C + k+ r+++ ++r+gC+a++++ TRIDC2BG054780.1 41 EFYNLYSWECGFVVRLAKSRMNVRRK-RCMQEILCACADKP---------MRKNSRSSRCGCEAMIRL 98 6*****************99995555.34445555554444.........45667799*******987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 104 aa Download sequence |
MNPDRKTTLE LSVRAYAETR HGPVVNPETG TAFDSLDEAY EFYNLYSWEC GFVVRLAKSR 60 MNVRRKRCMQ EILCACADKP MRKNSRSSRC GCEAMIRLLR PNFT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G80010.1 | 1e-10 | FAR1 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG054780.1 |