PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG054220.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 608aa MW: 66521.5 Da PI: 6.9916

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG054220.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.2	3.4e-28	232	283	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i +++l+kyFs+++kdAAk+Lgvc+T+LKriCR +GI+RWP+Rki+++ TRIDC2BG054220.10 232 AEKNIGMDVLRKYFSGSLKDAAKSLGVCPTTLKRICRTHGISRWPSRKINKV 283 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MLPLALTWVP SSNGSDGGYV GHDSVLDSQS GKTILRIHES ACYVNDAKMQ GFFHACTETH 60 LEKGQGIAGR ALKSNLPFFS PNIREYGIKD YPLAHHARKF GLHAAVAIRL RSTYTGDDDY 120 ILEFFLPINC TGSEEQQMLL NNLSSTMQRI CKSLRTVSEA EVDKVDACTA VMYKATSGSC 180 LPTGQSESSS RGDQPATEEA FQDLSLIDKQ RGMSEQAQSS TMRLAEKKRS TAEKNIGMDV 240 LRKYFSGSLK DAAKSLGVCP TTLKRICRTH GISRWPSRKI NKVNRSLKKI QTVINSVHGV 300 DSSLQYDPAT GSLVPAVSLP EKTSFPSCDA VSSPSVGKTV DEKSGPKSEQ GYSSPEGWER 360 ESCQLQRPDA QKGEGDEFHM QTSNYSGSGD HASYGANVTH HINSEGTQEP LYPIGAVSAL 420 HDKETGCIEP SARVLPSIKT TRDQIVGRNS PPAQQADIDM FDDREGREHT HPSTSGMTDS 480 SSGSASSHPT FKKNPARPLK DKSSPALTVK ATYNGDTVRF KFLPSMGWYN LLEEIAKRFK 540 LSMGVFQLKY KDDEDEWVIM ANNSDLQECV DVMDSMGTRN VKLQVRDLPC LISSSGSSSC 600 LQLEGHNS

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MLPLALTWVP SSNGSDGGYV GHDSVLDSQS GKTILRIHES ACYVNDAKMQ GFFHACTETH  60
LEKGQGIAGR ALKSNLPFFS PNIREYGIKD YPLAHHARKF GLHAAVAIRL RSTYTGDDDY  120
ILEFFLPINC TGSEEQQMLL NNLSSTMQRI CKSLRTVSEA EVDKVDACTA VMYKATSGSC  180
LPTGQSESSS RGDQPATEEA FQDLSLIDKQ RGMSEQAQSS TMRLAEKKRS TAEKNIGMDV  240
LRKYFSGSLK DAAKSLGVCP TTLKRICRTH GISRWPSRKI NKVNRSLKKI QTVINSVHGV  300
DSSLQYDPAT GSLVPAVSLP EKTSFPSCDA VSSPSVGKTV DEKSGPKSEQ GYSSPEGWER  360
ESCQLQRPDA QKGEGDEFHM QTSNYSGSGD HASYGANVTH HINSEGTQEP LYPIGAVSAL  420
HDKETGCIEP SARVLPSIKT TRDQIVGRNS PPAQQADIDM FDDREGREHT HPSTSGMTDS  480
SSGSASSHPT FKKNPARPLK DKSSPALTVK ATYNGDTVRF KFLPSMGWYN LLEEIAKRFK  540
LSMGVFQLKY KDDEDEWVIM ANNSDLQECV DVMDSMGTRN VKLQVRDLPC LISSSGSSSC  600
LQLEGHNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-98	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG054220.10