PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG052850.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 332aa MW: 36870.2 Da PI: 8.9144

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG052850.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	90	2.6e-28	15	102	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt...sessstcpyfdqle 86 W ++e+l Li++rrem+++++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk + ++++ + + s +++y+++++ TRIDC2BG052850.3 15 WVQDETLSLIALRREMDNHFNTSKSNKHLWEAISAKMREQGFDRSPTMCTDKWRNLLKEFKKARSHARSSAgagGNGSAKMAYYKEID 102 *****************************************************************99987433456677899998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
SSSRASAPKK RAETWVQDET LSLIALRREM DNHFNTSKSN KHLWEAISAK MREQGFDRSP 60 TMCTDKWRNL LKEFKKARSH ARSSAGAGGN GSAKMAYYKE IDDLLKRRGK AAASPAGSGG 120 GGGAAKSPTP TSKIESYLQF ADKGFEDANI PFGPVEASHP LALTTADAVA TNGVNPWNWR 180 DTSTNGGDNQ GTYGGRVILV KWGDYTKRIG IDGTAEAIKE AIKSAFGLRT RRAFWLEDED 240 EVVRSLDRDM PVGVYALHLD NGITIKLCTF EDADRMTVRT EDKTFYTEDD FRDFLSRRGW 300 TLLREYSGYR VADTLDDLRP GAIYQGMRSL VD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	1e-131	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG052850.3