PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG048520.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 416aa MW: 44900.1 Da PI: 6.5847

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG048520.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40	1e-12	75	156	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W++ + aLi+a e+ +l+rg+l+ p+W+ev++++ + +s +qCk++++ l+k+yk +++ + +++++d+l+ TRIDC2BG048520.2 75 WSEGATSALIDAWGERFVALGRGSLRHPQWQEVAEAVssrdNYSKAPKSDVQCKNRIDTLKKKYKIERAKPVS-------SWQFYDRLD 156 ***********************************84444445566889************99887765.......589998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MDDDDNSPSP SLSPASSSPL PVASALPVAD PVTVASAPPG GPLTLALPIQ KHGSYPSHGG 60 SGGGGGGGGG REDAWSEGAT SALIDAWGER FVALGRGSLR HPQWQEVAEA VSSRDNYSKA 120 PKSDVQCKNR IDTLKKKYKI ERAKPVSSWQ FYDRLDVLLA PTYNQKPAAH PNGRNAVPTA 180 LRAGFPQRSR TPLMPASAPV KRRAPSPELS ASSESSDGFP PEPALPAANG KRRRTDEGRV 240 DGFSGGDRSQ GMRELAQAIR RLGEAYERVE TAKLEQAAEM ERQRLDFARE LESQRVQFFL 300 NTQKELSQGK SHISPAAAAS HSQVGAATVG GSSRRMASVP DSTSRRMAPF PDARTSSNHH 360 DRYRASDGSR HHHRPALRPH YQYHENNMAD SAAASDGEQS DEEEEEEDDD NEEESQ

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MDDDDNSPSP SLSPASSSPL PVASALPVAD PVTVASAPPG GPLTLALPIQ KHGSYPSHGG  60
SGGGGGGGGG REDAWSEGAT SALIDAWGER FVALGRGSLR HPQWQEVAEA VSSRDNYSKA  120
PKSDVQCKNR IDTLKKKYKI ERAKPVSSWQ FYDRLDVLLA PTYNQKPAAH PNGRNAVPTA  180
LRAGFPQRSR TPLMPASAPV KRRAPSPELS ASSESSDGFP PEPALPAANG KRRRTDEGRV  240
DGFSGGDRSQ GMRELAQAIR RLGEAYERVE TAKLEQAAEM ERQRLDFARE LESQRVQFFL  300
NTQKELSQGK SHISPAAAAS HSQVGAATVG GSSRRMASVP DSTSRRMAPF PDARTSSNHH  360
DRYRASDGSR HHHRPALRPH YQYHENNMAD SAAASDGEQS DEEEEEEDDD NEEESQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11100.1	5e-42	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG048520.2