PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047940.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 202aa    MW: 23541.2 Da    PI: 7.0599
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047940.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.59.9e-251058250
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                      rien   rqvtf+kRr g+lKKA+ELSvLCda++ v++fs++gk+ye +
  TRIDC2BG047940.2 10 RIENPVHRQVTFCKRRMGLLKKAKELSVLCDADIGVMVFSPHGKVYELA 58
                      8*********************************************965 PP
2K-box59.41.5e-2077173499
             K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGe.dLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                       ++g+s e++k e  qqe+  L++ei+ Lq+ +R + Ge d++ ++l+eLq Le++Le  + +iR +K++++ ++ie l+ ke  l+ +n  L+
  TRIDC2BG047940.2  77 AHGESSEQNKPEVIQQEVLLLRQEIDLLQKGLRYMYGEnDINHMNLNELQTLESNLEIWVHNIRYTKMQIISREIEMLKTKEGILKAANDILQ 169
                       45667899999**************************978****************************************************9 PP

             K-box  96 kkle 99 
                       +++ 
  TRIDC2BG047940.2 170 ERII 173
                       9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MARGKVQMRR IENPVHRQVT FCKRRMGLLK KAKELSVLCD ADIGVMVFSP HGKVYELATN  60
GNMQGLIERY KGSNTEAHGE SSEQNKPEVI QQEVLLLRQE IDLLQKGLRY MYGENDINHM  120
NLNELQTLES NLEIWVHNIR YTKMQIISRE IEMLKTKEGI LKAANDILQE RIIEQSGILD  180
TSSNMMMPQF PFQRTMESDY YF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.12e-62MIKC_MADS family protein