PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG047610.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 600aa MW: 66607.1 Da PI: 5.9177 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.6 | 1.2e-23 | 124 | 225 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++ +++aee+ ++++++ ++l+ +d++g W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + TRIDC2BG047610.9 124 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RG 213 99*****************************7556666.59************************************************..44 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 +++el+v+v+r+ TRIDC2BG047610.9 214 ENGELRVGVRRH 225 9999******96 PP | |||||||
2 | Auxin_resp | 100.3 | 2.5e-33 | 250 | 335 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+ +++++ W +S W+sLk TRIDC2BG047610.9 250 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 335 789*************************************************************997222578889********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 600 aa Download sequence |
MAMANPSAAG APGICSDALF RELWHACAGP LITVPRQGER VYYFPQGHME QLEASTNQQL 60 DQYLPMFNLP SKILCSVVNV ELRTEADSDE VYAQIMLQPE ANQGELTSLG PEPQELEKGT 120 IHSFCKTLTA SDTSTHGGFS VLRRHAEECL PPLDMSQNPP CQELVAKDLH GTDWHFRHIF 180 RGQPRRHLLT TGWSVFVSSK RLVAGDAFIF LRGENGELRV GVRRHMRQVN NMPSSVISSH 240 SMHLGVLATA SHAISTGTLF SVFYKPRTSQ SEFVVSVNKY LEAKKQNISV GMRFKMKFEG 300 DEALERRFSG TIIGIGSTPT MSTSPWADSD WKSLKVQWDE PSSILRPDRV SPWELEPLDA 360 ANPQPPQPPL RNKRPRLPAS SSVVPELAPK FGLWKSPAEP SQTLSFSEPQ QARGLFTNSR 420 FSSSSNVAFN QFYWPARESR EDSYAGSTNK VTVERKLEPT AGGCRLFGIE IRSAVEETQP 480 VLTVSGDGYD QTAASVDVDS GELSQPSNIN NSGAQAASSE RALLETQSRQ VRSCTKVIMT 540 GMAVGRAVDL TKLYGYVDLH RKLEEMFDIQ GELCSTLKKW QVVYADEEDD MMLVGDDPWE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.4 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG047610.9 |