PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG047610.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 486aa MW: 53896.7 Da PI: 6.8781

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG047610.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34.3	4.3e-11	12	57	52	99
.EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++++r++lt+GW+ Fv++++L +gD ++F + +++el+v+v+r+ TRIDC2BG047610.7 12 FGGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRH 57 467899************************..449999****96 PP
2	Auxin_resp	100.8	1.8e-33	82	167	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+ +++++ W +S W+sLk TRIDC2BG047610.7 82 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 167 789***********************************************************997222578889******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
SMELTGIFVT YFGGQPRRHL LTTGWSVFVS SKRLVAGDAF IFLRGENGEL RVGVRRHMRQ 60 VNNMPSSVIS SHSMHLGVLA TASHAISTGT LFSVFYKPRT SQSEFVVSVN KYLEAKKQNI 120 SVGMRFKMKF EGDEALERRF SGTIIGIGST PTMSTSPWAD SDWKSLKVQW DEPSSILRPD 180 RVSPWELEPL DAANPQPPQP PLRNKRPRLP ASSSVVPELA PKFGLWKSPA EPSQTLSFSE 240 PQQARGLFTN SRFSSSSNVA FNQFYWPARE SREDSYAGST NKVTVERKLE PTAGGCRLFG 300 IEIRSAVEET QPVLTVSGDG YDQTAASVDV DSGELSQPSN INNSGAQAAS SERALLETQS 360 RQVRSCTKVI MTGMAVGRAV DLTKLYGYVD LHRKLEEMFD IQGELCSTLK KWQVVYADEE 420 DDMMLVGDDP WDEFCSMAKR IYIYTYEEAK QLAPKATKLS RVNSSHESVT PQSGSEYPAS 480 FANADC

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

SMELTGIFVT YFGGQPRRHL LTTGWSVFVS SKRLVAGDAF IFLRGENGEL RVGVRRHMRQ  60
VNNMPSSVIS SHSMHLGVLA TASHAISTGT LFSVFYKPRT SQSEFVVSVN KYLEAKKQNI  120
SVGMRFKMKF EGDEALERRF SGTIIGIGST PTMSTSPWAD SDWKSLKVQW DEPSSILRPD  180
RVSPWELEPL DAANPQPPQP PLRNKRPRLP ASSSVVPELA PKFGLWKSPA EPSQTLSFSE  240
PQQARGLFTN SRFSSSSNVA FNQFYWPARE SREDSYAGST NKVTVERKLE PTAGGCRLFG  300
IEIRSAVEET QPVLTVSGDG YDQTAASVDV DSGELSQPSN INNSGAQAAS SERALLETQS  360
RQVRSCTKVI MTGMAVGRAV DLTKLYGYVD LHRKLEEMFD IQGELCSTLK KWQVVYADEE  420
DDMMLVGDDP WDEFCSMAKR IYIYTYEEAK QLAPKATKLS RVNSSHESVT PQSGSEYPAS  480
FANADC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG047610.7