PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047610.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 654aa    MW: 72581.7 Da    PI: 6.0233
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047610.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.41.4e-23124225199
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++ +++aee+      ++++++ ++l+ +d++g  W +++i+r++++r++lt+GW+ Fv++++L +gD ++F   + 
  TRIDC2BG047610.3 124 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RG 213
                       99*****************************7556666.59************************************************..44 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                       +++el+v+v+r+
  TRIDC2BG047610.3 214 ENGELRVGVRRH 225
                       9999******96 PP
2Auxin_resp100.22.9e-33250335183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 
                       a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+    +++++ W +S W+sLk
  TRIDC2BG047610.3 250 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 335
                       789*************************************************************997222578889********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    
MAMANPSAAG APGICSDALF RELWHACAGP LITVPRQGER VYYFPQGHME QLEASTNQQL  60
DQYLPMFNLP SKILCSVVNV ELRTEADSDE VYAQIMLQPE ANQGELTSLG PEPQELEKGT  120
IHSFCKTLTA SDTSTHGGFS VLRRHAEECL PPLDMSQNPP CQELVAKDLH GTDWHFRHIF  180
RGQPRRHLLT TGWSVFVSSK RLVAGDAFIF LRGENGELRV GVRRHMRQVN NMPSSVISSH  240
SMHLGVLATA SHAISTGTLF SVFYKPRTSQ SEFVVSVNKY LEAKKQNISV GMRFKMKFEG  300
DEALERRFSG TIIGIGSTPT MSTSPWADSD WKSLKVQWDE PSSILRPDRV SPWELEPLDA  360
ANPQPPQPPL RNKRPRLPAS SSVVPELAPK FGLWKSPAEP SQTLSFSEPQ QARGLFTNSR  420
FSSSSNVAFN QFYWPARESR EDSYAGSTNK VTVERKLEPT AGGCRLFGIE IRSAVEETQP  480
VLTVSGDGYD QTAASVDVDS GELSQPSNIN NSGAQAASSE RALLETQSRQ VRSCTKVIMT  540
GMAVGRAVDL TKLYGYVDLH RKLEEMFDIQ GELCSTLKKW QVVYADEEDD MMLVGDDPWD  600
EFCSMAKRIY IYTYEEAKQL APKATKLSRV NSSHESVTPQ SGSEYPASFA NADC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein