PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG047610.17 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 250aa MW: 27831.8 Da PI: 10.702 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.6 | 1.6e-11 | 11 | 56 | 52 | 99 |
.EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 52 yrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + ++++r++lt+GW+ Fv++++L +gD ++F + +++el+v+v+r+ TRIDC2BG047610.17 11 FGGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--RGENGELRVGVRRH 56 467899**************************..449999******96 PP | |||||||
2 | Auxin_resp | 102.5 | 5.5e-34 | 81 | 166 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+ +++++ W +S W+sLk TRIDC2BG047610.17 81 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 166 789*************************************************************997222578889********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MELTGIFVTY FGGQPRRHLL TTGWSVFVSS KRLVAGDAFI FLRGENGELR VGVRRHMRQV 60 NNMPSSVISS HSMHLGVLAT ASHAISTGTL FSVFYKPRTS QSEFVVSVNK YLEAKKQNIS 120 VGMRFKMKFE GDEALERRFS GTIIGIGSTP TMSTSPWADS DWKSLKVQWD EPSSILRPDR 180 VSPWELEPLD AANPQPPQPP LRNKRPRLPA SSSVVPELAP KFGLWKSPAE PSQTLSFSEP 240 QQARGLFTNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.4 | 1e-113 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG047610.17 |