PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047610.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 397aa    MW: 44182.8 Da    PI: 8.6261
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047610.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.55.9e-2429130199
                        EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+k+lt sd++++g +++ +++aee+      ++++++ ++l+ +d++g  W +++i+r++++r++lt+GW+ Fv++++L +gD ++F   +
  TRIDC2BG047610.16  29 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--R 117
                        99*****************************7556666.59************************************************..4 PP

                        SSEE..EEEEE-S CS
                 B3  87 rsefelvvkvfrk 99 
                         +++el+v+v+r+
  TRIDC2BG047610.16 118 GENGELRVGVRRH 130
                        49999******96 PP
2Auxin_resp101.31.3e-33155240183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 
                        a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+    +++++ W +S W+sLk
  TRIDC2BG047610.16 155 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 240
                        789*************************************************************997222578889********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MLQPEANQGE LTSLGPEPQE LEKGTIHSFC KTLTASDTST HGGFSVLRRH AEECLPPLDM  60
SQNPPCQELV AKDLHGTDWH FRHIFRGQPR RHLLTTGWSV FVSSKRLVAG DAFIFLRGEN  120
GELRVGVRRH MRQVNNMPSS VISSHSMHLG VLATASHAIS TGTLFSVFYK PRTSQSEFVV  180
SVNKYLEAKK QNISVGMRFK MKFEGDEALE RRFSGTIIGI GSTPTMSTSP WADSDWKSLK  240
VQWDEPSSIL RPDRVSPWEL EPLDAANPQP PQPPLRNKRP RLPASSSVVP ELAPKFGLWK  300
SPAEPSQTLS FSEPQQARGL FTNSRFSSSS NVAFNQFYWP ARESREDSYA GSTNKVTVER  360
KLEPTAGGCR LFGIEIRSAV EETQPVLTVS GDGYDQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.41e-169ARF family protein