PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047610.15
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 723aa    MW: 80584.1 Da    PI: 7.9128
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047610.15genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.21.6e-23240341199
                        EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+k+lt sd++++g +++ +++aee+      ++++++ ++l+ +d++g  W +++i+r++++r++lt+GW+ Fv++++L +gD ++F   +
  TRIDC2BG047610.15 240 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--R 328
                        99*****************************7556666.59************************************************..4 PP

                        SSEE..EEEEE-S CS
                 B3  87 rsefelvvkvfrk 99 
                         +++el+v+v+r+
  TRIDC2BG047610.15 329 GENGELRVGVRRH 341
                        49999******96 PP
2Auxin_resp1003.3e-33366451183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 
                        a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+    +++++ W +S W+sLk
  TRIDC2BG047610.15 366 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 451
                        789*************************************************************997222578889********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    
KSQASTHLTL LLLPPPHHTR YTPPPPRLSR RPDPLPREQT PHVTRIRPRC RPPASSPVHG  60
RPIRGNSSIP GGPAVEADPW SGAGRSVEAS TSRGALGFVA HGEFSCRLAR QTWLQRWRWR  120
ILPRPVPQGI CSDALFRELW HACAGPLITV PRQGERVYYF PQGHMEQLEA STNQQLDQYL  180
PMFNLPSKIL CSVVNVELRT EADSDEVYAQ IMLQPEANQG ELTSLGPEPQ ELEKGTIHSF  240
CKTLTASDTS THGGFSVLRR HAEECLPPLD MSQNPPCQEL VAKDLHGTDW HFRHIFRGQP  300
RRHLLTTGWS VFVSSKRLVA GDAFIFLRGE NGELRVGVRR HMRQVNNMPS SVISSHSMHL  360
GVLATASHAI STGTLFSVFY KPRTSQSEFV VSVNKYLEAK KQNISVGMRF KMKFEGDEAL  420
ERRFSGTIIG IGSTPTMSTS PWADSDWKSL KVQWDEPSSI LRPDRVSPWE LEPLDAANPQ  480
PPQPPLRNKR PRLPASSSVV PELAPKFGLW KSPAEPSQTL SFSEPQQARG LFTNSRFSSS  540
SNVAFNQFYW PARESREDSY AGSTNKVTVE RKLEPTAGGC RLFGIEIRSA VEETQPVLTV  600
SGDGYDQTAA SVDVDSGELS QPSNINNSGA QAASSERALL ETQSRQVRSC TKVIMTGMAV  660
GRAVDLTKLY GYVDLHRKLE EMFDIQGELC STLKKWQVVY ADEEDDMMLV GDDPWDEFCS  720
MAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.40.0ARF family protein