PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG047610.14 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARF | ||||||||
Protein Properties | Length: 631aa MW: 70543.5 Da PI: 6.3574 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.5 | 1.3e-23 | 114 | 215 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++ +++aee+ ++++++ ++l+ +d++g W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + TRIDC2BG047610.14 114 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--R 202 99*****************************7556666.59************************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++el+v+v+r+ TRIDC2BG047610.14 203 GENGELRVGVRRH 215 49999******96 PP | |||||||
2 | Auxin_resp | 100.2 | 2.7e-33 | 240 | 325 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+ +++++ W +S W+sLk TRIDC2BG047610.14 240 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 325 789*************************************************************997222578889********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 631 aa Download sequence |
FVRICSDALF RELWHACAGP LITVPRQGER VYYFPQGHME QLEASTNQQL DQYLPMFNLP 60 SKILCSVVNV ELRTEADSDE VYAQIMLQPE ANQGELTSLG PEPQELEKGT IHSFCKTLTA 120 SDTSTHGGFS VLRRHAEECL PPLDMSQNPP CQELVAKDLH GTDWHFRHIF RGQPRRHLLT 180 TGWSVFVSSK RLVAGDAFIF LRGENGELRV GVRRHMRQVN NMPSSVISSH SMHLGVLATA 240 SHAISTGTLF SVFYKPRTSQ SEFVVSVNKY LEAKKQNISV GMRFKMKFEG DEALERRFSG 300 TIIGIGSTPT MSTSPWADSD WKSLKVQWDE PSSILRPDRV SPWELEPLDA ANPQPPQPPL 360 RNKRPRLPAS SSVVPELAPK FGLWKSPAEP SQTLSFSEPQ QARGLFTNSR FSSSSNVAFN 420 QFYWPARESR EDSYAGSTNK VTVERKLEPT AGGCRLFGIE IRSAVEETQP VLTVSGDGYD 480 QTAASVDVDS GELSQPSNIN NSGAQAASSE RALLETQSRQ VRSCTKVIMT GMAVGRAVDL 540 TKLYGYVDLH RKLEEMFDIQ GELCSTLKKW QVVYADEEDD MMLVGDDPWD EFCSMAKRIY 600 IYTYEEAKQL APKATKLSRV NSSHESVTPQ S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.4 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG047610.14 |