PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG047610.13

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 597aa MW: 66563.9 Da PI: 5.9511

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG047610.13	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.6	1.2e-23	76	177	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++ +++aee+ ++++++ ++l+ +d++g W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + TRIDC2BG047610.13 76 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--R 164 99***************************7556666.59********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++el+v+v+r+ TRIDC2BG047610.13 165 GENGELRVGVRRH 177 49999****96 PP
2	Auxin_resp	100.4	2.5e-33	202	287	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+ +++++ W +S W+sLk TRIDC2BG047610.13 202 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 287 789***********************************************************997222578889******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MEQLEASTNQ QLDQYLPMFN LPSKILCSVV NVELRTEADS DEVYAQIMLQ PEANQGELTS 60 LGPEPQELEK GTIHSFCKTL TASDTSTHGG FSVLRRHAEE CLPPLDMSQN PPCQELVAKD 120 LHGTDWHFRH IFRGQPRRHL LTTGWSVFVS SKRLVAGDAF IFLRGENGEL RVGVRRHMRQ 180 VNNMPSSVIS SHSMHLGVLA TASHAISTGT LFSVFYKPRT SQSEFVVSVN KYLEAKKQNI 240 SVGMRFKMKF EGDEALERRF SGTIIGIGST PTMSTSPWAD SDWKSLKVQW DEPSSILRPD 300 RVSPWELEPL DAANPQPPQP PLRNKRPRLP ASSSVVPELA PKFGLWKSPA EPSQTLSFSE 360 PQQARGLFTN SRFSSSSNVA FNQFYWPARE SREDSYAGST NKVTVERKLE PTAGGCRLFG 420 IEIRSAVEET QPVLTVSGDG YDQTAASVDV DSGELSQPSN INNSGAQAAS SERALLETQS 480 RQVRSCTKVI MTGMAVGRAV DLTKLYGYVD LHRKLEEMFD IQGELCSTLK KWQVVYADEE 540 DDMMLVGDDP WDEFCSMAKR IYIYTYEEAK QLAPKATKLS RVNSSHESVT PQSGSEY

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MEQLEASTNQ QLDQYLPMFN LPSKILCSVV NVELRTEADS DEVYAQIMLQ PEANQGELTS  60
LGPEPQELEK GTIHSFCKTL TASDTSTHGG FSVLRRHAEE CLPPLDMSQN PPCQELVAKD  120
LHGTDWHFRH IFRGQPRRHL LTTGWSVFVS SKRLVAGDAF IFLRGENGEL RVGVRRHMRQ  180
VNNMPSSVIS SHSMHLGVLA TASHAISTGT LFSVFYKPRT SQSEFVVSVN KYLEAKKQNI  240
SVGMRFKMKF EGDEALERRF SGTIIGIGST PTMSTSPWAD SDWKSLKVQW DEPSSILRPD  300
RVSPWELEPL DAANPQPPQP PLRNKRPRLP ASSSVVPELA PKFGLWKSPA EPSQTLSFSE  360
PQQARGLFTN SRFSSSSNVA FNQFYWPARE SREDSYAGST NKVTVERKLE PTAGGCRLFG  420
IEIRSAVEET QPVLTVSGDG YDQTAASVDV DSGELSQPSN INNSGAQAAS SERALLETQS  480
RQVRSCTKVI MTGMAVGRAV DLTKLYGYVD LHRKLEEMFD IQGELCSTLK KWQVVYADEE  540
DDMMLVGDDP WDEFCSMAKR IYIYTYEEAK QLAPKATKLS RVNSSHESVT PQSGSEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.4	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG047610.13