PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047610.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 393aa    MW: 44219.3 Da    PI: 7.3713
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047610.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.65.8e-24114215199
                        EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+k+lt sd++++g +++ +++aee+      ++++++ ++l+ +d++g  W +++i+r++++r++lt+GW+ Fv++++L +gD ++F   +
  TRIDC2BG047610.12 114 FCKTLTASDTSTHGGFSVLRRHAEEClppldmSQNPPC-QELVAKDLHGTDWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFL--R 202
                        99*****************************7556666.59************************************************..4 PP

                        SSEE..EEEEE-S CS
                 B3  87 rsefelvvkvfrk 99 
                         +++el+v+v+r+
  TRIDC2BG047610.12 203 GENGELRVGVRRH 215
                        49999******96 PP
2Auxin_resp101.31.3e-33240325183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvs...dldpvrWpnSkWrsLk 83 
                        a+ha+st++ F+v+Y+Pr+s+seFvv+v+k+++a k+++svGmRfkm+fe++++ err+sGt++g+    +++++ W +S W+sLk
  TRIDC2BG047610.12 240 ASHAISTGTLFSVFYKPRTSQSEFVVSVNKYLEAKKQNISVGMRFKMKFEGDEALERRFSGTIIGIGstpTMSTSPWADSDWKSLK 325
                        789*************************************************************997222578889********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
FVRICSDALF RELWHACAGP LITVPRQGER VYYFPQGHME QLEASTNQQL DQYLPMFNLP  60
SKILCSVVNV ELRTEADSDE VYAQIMLQPE ANQGELTSLG PEPQELEKGT IHSFCKTLTA  120
SDTSTHGGFS VLRRHAEECL PPLDMSQNPP CQELVAKDLH GTDWHFRHIF RGQPRRHLLT  180
TGWSVFVSSK RLVAGDAFIF LRGENGELRV GVRRHMRQVN NMPSSVISSH SMHLGVLATA  240
SHAISTGTLF SVFYKPRTSQ SEFVVSVNKY LEAKKQNISV GMRFKMKFEG DEALERRFSG  300
TIIGIGSTPT MSTSPWADSD WKSLKVQWDE PSSILRPDRV SPWELEPLDA ANPQPPQPPL  360
RNKRPRLPAS SSVVPELAPK FGKIYELLST CYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59750.20.0ARF family protein