PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG047330.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 90aa    MW: 10323.9 Da    PI: 8.6128
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG047330.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH215.9e-073455326
                      S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                       e Cr++++   C++ ++C+FaH+
  TRIDC2BG047330.6 34 VEVCRDYLK-KMCNR-ESCRFAHP 55
                      589******.*****.*******9 PP
2zf-CCCH231.4e-076587226
                      -S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                      k e Cr+f r G+C + ++C+F H+
  TRIDC2BG047330.6 65 KVEVCRDFKR-GECTR-PTCRFYHP 87
                      89********.*****.*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
RWVYMPPPPP PLGVPMMAPP LSPPRGFADN KSTVEVCRDY LKKMCNRESC RFAHPDSQTE  60
VAHDKVEVCR DFKRGECTRP TCRFYHPSSS