PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG046480.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 234aa    MW: 24080.9 Da    PI: 9.9735
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG046480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.51.1e-2062111255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+W+AeIrdp     + +r++lg+f tae+Aa+a++aa+++++g
  TRIDC2BG046480.1  62 KYRGVRRRP-WGKWAAEIRDPQ----KaARVWLGTFATAEDAARAYDAAALRFRG 111
                       8********.**********93....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
EALSEQALAA ETAAIVSALT HVIASGRGPP APAPPLLMPC RPGVQQLGAS TSSRGTEATP  60
RKYRGVRRRP WGKWAAEIRD PQKAARVWLG TFATAEDAAR AYDAAALRFR GSRAKLNFPE  120
DAAAATARRA RDAATAAAAA SSKPAALLES QDGDVMDYLD YSKILAEPEP SNVMGRLLGG  180
DGNGRFLGSW SIGTSPASSA SSASLAGAGP ASVALFPCGS GLKQSSESSS HRGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.17e-25ERF family protein