PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG044600.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 287aa    MW: 30813.9 Da    PI: 10.3202
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG044600.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix84.31.5e-2622110182
          trihelix   1 rWtkqevlaLiearremeerlr.rgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                       rWt+qe+l+Lie++r +e r r rg+       ++ ++W++v++++r++g+er+p+qC+++w+nl+++ykki+e+e++  s + ++++ f
  TRIDC2BG044600.4  22 RWTRQEILVLIEGKRVVEVRGRgRGRgaaggaaAEPTKWAAVAEYCRRHGVERGPVQCRKRWSNLAGDYKKIREWERSLPSLAGKEVS-F 110
                       8*****************99995332345555599******************************************98766665443.3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MSSAGDPGGG IAGPGRAARL PRWTRQEILV LIEGKRVVEV RGRGRGRGAA GGAAAEPTKW  60
AAVAEYCRRH GVERGPVQCR KRWSNLAGDY KKIREWERSL PSLAGKEVSF WAMRNDARRE  120
RRLPGFFDRE VYDIIEGRGS GGGGIRDSGS NAAVALAETG EEEGKEKLVF DSGRASAAGD  180
DGLFSSSSSS EEEDEETSTP APAPAPAPVP VLPAAPYPPP SQVPTVVAVA VPVPVPEKKT  240
EGHPKASNKK KLELPMSRHY RRVGRRGSAA MMPQEKPLTC RASLLRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.17e-36Trihelix family protein