PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG042100.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 306aa    MW: 33491.2 Da    PI: 5.9688
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG042100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26093.32.7e-2941091100
            DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqql 87 
                       +C++C+vlr++C++dC ++p++     p++q++++ +++k++G++ +++l++a  ++  r+ +++sl+yeA+ r+ +P+yG+vg++++ ++q+
  TRIDC2BG042100.1   4 SCNGCRVLRKGCSEDCSIRPCLqwiksPEAQANATVFLAKFYGRAGLMNLINAGTDDSlRPGIFRSLLYEACGRIVNPIYGSVGLLWSNNWQM 96 
                       6****************************************************977666********************************** PP

            DUF260  88 eqlkaelallkee 100
                       +q+++e++l +++
  TRIDC2BG042100.1  97 CQAAVEAVLSGKP 109
                       ******9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MRLSCNGCRV LRKGCSEDCS IRPCLQWIKS PEAQANATVF LAKFYGRAGL MNLINAGTDD  60
SLRPGIFRSL LYEACGRIVN PIYGSVGLLW SNNWQMCQAA VEAVLSGKPI VQVSSEDAAA  120
DRTPPLKAYD IRHVSTSSAA DGRLHKVAKP GRTRFKRASS ASSHHNPSSD SNNKPKPQPQ  180
PRAPTAEEER DRQHRKEMEE GAFQRAPSHE SSDSRHEDPV EPHCQQEASA DTEAEAGSHV  240
SQAEQEQEQE QSTEPAAEHA EEVEKEDEEL GLELTLGFAP VAARPAGFHL SVRTAAEPAF  300
VGLRFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.12e-79LBD family protein