PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG041960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 279aa MW: 29163.8 Da PI: 10.4886 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.3 | 4e-10 | 259 | 279 | 2 | 22 |
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 D ++WrKYGqK++kgs++pr TRIDC2BG041960.1 259 ADDFSWRKYGQKPIKGSPYPR 279 699*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
PFPLSGEHLS YLVRAVAMMT MDLIGGYGRA DEQVAIQEAA AAGLRGMEHL ILQLSRTGTS 60 ESSPVGSSEA PEQQVDCREI TDMTVSKFKK VISILNHRTG HARFRRGPVV AQSQGPAVSE 120 PAPVRASSSR SVTLDFTKAS SGYGNDAGFS VSAASSSFMS SVTGDGSVSN GRGGGSSLML 180 PPLPSASCGK PPLASSAAST GAGAGQKRKC HDHAHSENVA GGKYGASGGR CHCSKRRKSR 240 VRRMTRVPAI SSKAAEIPAD DFSWRKYGQK PIKGSPYPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 9e-45 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG041960.1 |