PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG040760.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 273aa    MW: 31252.5 Da    PI: 9.6382
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG040760.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF101.82.4e-32959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krienk+nrqvtfskRrng+lKKA+E+SvLCdaevavi+fs++gklyey++
  TRIDC2BG040760.5  9 KRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAVIVFSPKGKLYEYAT 59
                      79***********************************************86 PP
2K-box110.32.1e-3678172498
             K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                       +   s+e++ + ++++e++kLk++ie++q+ ++hl+GedL+sL+lkeLqqLeqqLe+slk+iRs+K++l++e+i+elqkke++lqeenkaL+k
  TRIDC2BG040760.5  78 KALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLDSLNLKELQQLEQQLESSLKHIRSRKSHLMMESISELQKKERSLQEENKALQK 170
                       556667888899********************************************************************************9 PP

             K-box  97 kl 98 
                       ++
  TRIDC2BG040760.5 171 EV 172
                       87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MGRGKVQLKR IENKINRQVT FSKRRNGLLK KAHEISVLCD AEVAVIVFSP KGKLYEYATD  60
SSMDKILERY ERYSYAEKAL ISAESESEGN WCHEYRKLKA KIETIQKCHK HLMGEDLDSL  120
NLKELQQLEQ QLESSLKHIR SRKSHLMMES ISELQKKERS LQEENKALQK EVIKMPNKAS  180
RQQQQQQQQQ MQWEHQTQTT HTHTQNQPQA QTSSSSSSFM MRDQQAHAPQ QNVCSYPPVT  240
MGGEAAAAAA APGQQAQLRI GGLPPWMLSH LNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69120.11e-72MIKC_MADS family protein