PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG039960.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 457aa MW: 48827.3 Da PI: 8.9391

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG039960.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.9	2.4e-13	118	178	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g k + + g ++ +e+Aa+a+++a++k++g TRIDC2BG039960.3 118 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtrKGrQVHFTGGYDMEEKAARAYDQAALKYWG 178 78*****************98888666863355555688****************98 PP
2	AP2	52.2	1.5e-16	223	272	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I +s +k +lg+fgt eeAa+a++ a+ k++g TRIDC2BG039960.3 223 YRGVTRHHQHGRWQARIGRVSG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 272 9*************999754...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
YDVYGGPATA SVLAADEDAA AATAMANWVQ VARGATAYAT AENVLSAAAD RQQHLHHHPL 60 ALSMSSAGSL SSCVTAGAEY GGVVATVDGG RKRGGATAGQ KQPVHHRKSI DTFGQRTSQY 120 RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG RQVHFTGGYD MEEKAARAYD QAALKYWGPS 180 THINFPLEDY QQELEEMKNM TRQEYVAHLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG 240 RVSGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLNAVTNFD ITRYDVDKIM ASNTLLPGEL 300 ARRNKDANAA PLPLPAPDDC AASALVPVST PGTDTGGSGQ HRHHDVMSSG EAFSALHDLV 360 TVDGHTAQGG NGAHVHMSMS GASSLVTSLS NSREGSPDRG GGLSMLFAKP PQQPATTTAA 420 SPKLMSTLAP LGSWASSARP AAVSIAHMPM FAAWSDA

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

YDVYGGPATA SVLAADEDAA AATAMANWVQ VARGATAYAT AENVLSAAAD RQQHLHHHPL  60
ALSMSSAGSL SSCVTAGAEY GGVVATVDGG RKRGGATAGQ KQPVHHRKSI DTFGQRTSQY  120
RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG RQVHFTGGYD MEEKAARAYD QAALKYWGPS  180
THINFPLEDY QQELEEMKNM TRQEYVAHLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG  240
RVSGNKDLYL GTFGTQEEAA EAYDIAAIKF RGLNAVTNFD ITRYDVDKIM ASNTLLPGEL  300
ARRNKDANAA PLPLPAPDDC AASALVPVST PGTDTGGSGQ HRHHDVMSSG EAFSALHDLV  360
TVDGHTAQGG NGAHVHMSMS GASSLVTSLS NSREGSPDRG GGLSMLFAKP PQQPATTTAA  420
SPKLMSTLAP LGSWASSARP AAVSIAHMPM FAAWSDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-126	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG039960.3