PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG039960.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 436aa MW: 46524.2 Da PI: 8.0888

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG039960.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	40.4	7.5e-13	154	210	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+a+++a++k++g TRIDC2BG039960.2 154 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDQAALKYWG 210 78*****************77776664346655.77****************98 PP
2	AP2	52.3	1.4e-16	255	304	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I +s +k +lg+fgt eeAa+a++ a+ k++g TRIDC2BG039960.2 255 YRGVTRHHQHGRWQARIGRVSG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 304 9*************999754...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MALSLDNTSN FYYYGGGGGA GGQHGQSHGG CFLQQAYDVY GGPATASVLA ADEDAAAATA 60 MANWVQVARG ATAYATAENV LSAAADRQQH LHHHPLALSM SSAGSLSSCV TAGAEYGGVV 120 ATVDGGRKRG GATAGQKQPV HHRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCKKE 180 GQTRKGRQGG YDMEEKAARA YDQAALKYWG PSTHINFPLE DYQQELEEMK NMTRQEYVAH 240 LRRKSSGFSR GASMYRGVTR HHQHGRWQAR IGRVSGNKDL YLGTFGTQEE AAEAYDIAAI 300 KFRGLNAVTN FDITRYDVDK IMASNTLLPG ELARRNKDAN AAPLPLPAPD DCAASALVPV 360 STPGTDTGGS GQHRHHDVMS SGEAFSALHD LVTVDGHTAQ GGNGAHVHMS MSGASSLVTS 420 LSNSREGSPD RGGGLS

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MALSLDNTSN FYYYGGGGGA GGQHGQSHGG CFLQQAYDVY GGPATASVLA ADEDAAAATA  60
MANWVQVARG ATAYATAENV LSAAADRQQH LHHHPLALSM SSAGSLSSCV TAGAEYGGVV  120
ATVDGGRKRG GATAGQKQPV HHRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCKKE  180
GQTRKGRQGG YDMEEKAARA YDQAALKYWG PSTHINFPLE DYQQELEEMK NMTRQEYVAH  240
LRRKSSGFSR GASMYRGVTR HHQHGRWQAR IGRVSGNKDL YLGTFGTQEE AAEAYDIAAI  300
KFRGLNAVTN FDITRYDVDK IMASNTLLPG ELARRNKDAN AAPLPLPAPD DCAASALVPV  360
STPGTDTGGS GQHRHHDVMS SGEAFSALHD LVTVDGHTAQ GGNGAHVHMS MSGASSLVTS  420
LSNSREGSPD RGGGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-124	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG039960.2