PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG039540.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 175aa    MW: 19140 Da    PI: 6.2139
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG039540.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.42.6e-083312255
                       HHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH 22 eLrellPkaskapskKlsKaeiLekAveYIksLq 55
                        L+el+P++      K +Ka+iL +A+eY+ksLq
  TRIDC2BG039540.10  3 ALQELVPHC-----NKSDKASILDEAIEYLKSLQ 31
                       79******8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MKALQELVPH CNKSDKASIL DEAIEYLKSL QLQVQIMWMT TGMAPMMYPG AHQLMPPMAM  60
GLNSACMPAT QSLSQLQRIA PFMNHHLPNQ MPRVQSPAID SLNVGNQMQN NGVCGEPRNP  120
FLHPDDTLTA ASQLPDMFPY ASQKAQQNQN HQLLPNTDMP ASGPCPPSFA DGTGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.14e-22bHLH family protein