PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG035380.24 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 753aa MW: 83794.5 Da PI: 7.6696 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 22.2 | 4.5e-07 | 7 | 41 | 57 | 90 |
FAR1 57 etrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +rtgC a+l++k+ + ++vt+++ eHnH+la TRIDC2BG035380.24 7 DSRTGCLASLTIKLLPsANAFRVTEFVAEHNHPLA 41 689***********99899**************97 PP | |||||||
2 | FAR1 | 70.2 | 4.9e-22 | 89 | 188 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 fYn+YA++vGFsvr+s++k++ +g i++r fvCs+eg +++ k++ + r + trtgC+a++++k + +++v+k TRIDC2BG035380.24 89 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAK 178 9*************9976655..9******************9999******99999977777778899*********************** PP FAR1 81 leleHnHela 90 + eHnH+la TRIDC2BG035380.24 179 FIAEHNHPLA 188 ********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 753 aa Download sequence |
PPPRCPDSRT GCLASLTIKL LPSANAFRVT EFVAEHNHPL ASAVSAVSLA MIPSSSSHHT 60 IAAAASLPDP RDGPLPEMHF ETEDDAYAFY NRYAEHVGFS VRRSYKKRKH GVIVSRIFVC 120 SREGVSDRAK HDGLASISTN AGGGAPGTPR PGPPPTRTGC QARMVIKITP CRTYRVAKFI 180 AEHNHPLANS ETVHKLRSHK MRARGHELGA GELHRRKQGK GVQLGDAGAA LEYLEGLQVG 240 NPSLYYAVGM APDGNSAVNF FWADAKSIID FRSFGDVVCF DTTYGLNVYG RPFALFVGVD 300 NHKQLLVFGA ALLYDDGIQS LKWVFQAFAD AMRDRQPKTI LIDERSECAI AAAEVWPGSN 360 HCTSVWHIYH SSKRHLKQVF ESSKSFGNAL SQCLFDCEDE MEFLSAWEKL IEKHDIGESE 420 WLSRLFLEKE KWALPYRRTV FSADILSTLR KDSMINELKR ELSEQEDILL FFKRYETMLE 480 EHRSKKLQAD VDGNQVTLPI PSLRMLKQSS NAYTPEAFKM FQGEFEAYMN CMSFPCSAVG 540 TVSEYKITLD EKPSEGIVKF DALDGLATCS CRKFESVGIQ CCHVLKVLDL KNIKELPEQY 600 ILKRWRKDAR SVRMGEEPNC GSSSIMRSSL DVRFSNMCRM VSLIASRAAK SEEAMSYIES 660 QSSVLLKHLD EILQTGYPEN GNHDVASSSQ AISFVGNHPD HTTQARAVAH TANGLTSLLG 720 ISAYPESSGQ LKVLICCHVD VSKYILKTLL FPI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 9e-85 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG035380.24 |