PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.24
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 753aa    MW: 83794.5 Da    PI: 7.6696
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.24genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.24.5e-077415790
               FAR1 57 etrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                        +rtgC a+l++k+    + ++vt+++ eHnH+la
  TRIDC2BG035380.24  7 DSRTGCLASLTIKLLPsANAFRVTEFVAEHNHPLA 41
                       689***********99899**************97 PP

2FAR170.24.9e-2289188290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                        fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k
  TRIDC2BG035380.24  89 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAK 178
                        9*************9976655..9******************9999******99999977777778899*********************** PP

               FAR1  81 leleHnHela 90 
                        +  eHnH+la
  TRIDC2BG035380.24 179 FIAEHNHPLA 188
                        ********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 753 aa     Download sequence    
PPPRCPDSRT GCLASLTIKL LPSANAFRVT EFVAEHNHPL ASAVSAVSLA MIPSSSSHHT  60
IAAAASLPDP RDGPLPEMHF ETEDDAYAFY NRYAEHVGFS VRRSYKKRKH GVIVSRIFVC  120
SREGVSDRAK HDGLASISTN AGGGAPGTPR PGPPPTRTGC QARMVIKITP CRTYRVAKFI  180
AEHNHPLANS ETVHKLRSHK MRARGHELGA GELHRRKQGK GVQLGDAGAA LEYLEGLQVG  240
NPSLYYAVGM APDGNSAVNF FWADAKSIID FRSFGDVVCF DTTYGLNVYG RPFALFVGVD  300
NHKQLLVFGA ALLYDDGIQS LKWVFQAFAD AMRDRQPKTI LIDERSECAI AAAEVWPGSN  360
HCTSVWHIYH SSKRHLKQVF ESSKSFGNAL SQCLFDCEDE MEFLSAWEKL IEKHDIGESE  420
WLSRLFLEKE KWALPYRRTV FSADILSTLR KDSMINELKR ELSEQEDILL FFKRYETMLE  480
EHRSKKLQAD VDGNQVTLPI PSLRMLKQSS NAYTPEAFKM FQGEFEAYMN CMSFPCSAVG  540
TVSEYKITLD EKPSEGIVKF DALDGLATCS CRKFESVGIQ CCHVLKVLDL KNIKELPEQY  600
ILKRWRKDAR SVRMGEEPNC GSSSIMRSSL DVRFSNMCRM VSLIASRAAK SEEAMSYIES  660
QSSVLLKHLD EILQTGYPEN GNHDVASSSQ AISFVGNHPD HTTQARAVAH TANGLTSLLG  720
ISAYPESSGQ LKVLICCHVD VSKYILKTLL FPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-85FAR1 family protein