PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.19
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 897aa    MW: 98765.9 Da    PI: 7.4682
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.19genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.72.9e-2197198190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgk 75 
                        +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + 
  TRIDC2BG035380.19  97 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANA 183
                        6*****************99997666.****************999955550....24455556666668899*************99899* PP

               FAR1  76 wevtkleleHnHela 90 
                        ++vt+++ eHnH+la
  TRIDC2BG035380.19 184 FRVTEFVAEHNHPLA 198
                        *************97 PP
2FAR169.96.3e-22246345290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                        fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k
  TRIDC2BG035380.19 246 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAK 335
                        9*************9976655..9******************9999******99999977777778899*********************** PP

               FAR1  81 leleHnHela 90 
                        +  eHnH+la
  TRIDC2BG035380.19 336 FIAEHNHPLA 345
                        ********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 897 aa     Download sequence    
NLFFLLPLLP PSFLQTLAQT LMSTTAHPPA SLSGDSSPTT SGSSSPSSSA FVAGSDEPAL  60
LGPATSTSTP SAAGDDAAVP SSPQMGMYFE TEDDAYEFYK VYAARLGFVV RKSNKSKNSR  120
HTVTRRLFVC SKQGFRQEPK KPQDETNATD VTVAAPPPPP RCPDSRTGCL ASLTIKLLPS  180
ANAFRVTEFV AEHNHPLASA VSAVSLAMIP SSSSHHTIAA AASLPDPRDG PLPEMHFETE  240
DDAYAFYNRY AEHVGFSVRR SYKKRKHGVI VSRIFVCSRE GVSDRAKHDG LASISTNAGG  300
GAPGTPRPGP PPTRTGCQAR MVIKITPCRT YRVAKFIAEH NHPLANSETV HKLRSHKMRA  360
RGHELGAGEL HRRKQGKGVQ LGDAGAALEY LEGLQVGNPS LYYAVGMAPD GNSAVNFFWA  420
DAKSIIDFRS FGDVVCFDTT YGLNVYGRPF ALFVGVDNHK QLLVFGAALL YDDGIQSLKW  480
VFQAFADAMR DRQPKTILID ERSECAIAAA EVWPGSNHCT SVWHIYHSSK RHLKQVFESS  540
KSFGNALSQC LFDCEDEMEF LSAWEKLIEK HDIGESEWLS RLFLEKEKWA LPYRRTVFSA  600
DILSTLRKDS MINELKRELS EQEDILLFFK RYETMLEEHR SKKLQADVDG NQVTLPIPSL  660
RMLKQSSNAY TPEAFKMFQG EFEAYMNCMS FPCSAVGTVS EYKITLDEKP SEGIVKFDAL  720
DGLATCSCRK FESVGIQCCH VLKVLDLKNI KELPEQYILK RWRKDARSVR MGEEPNCGSS  780
SIMRSSLDVR FSNMCRMVSL IASRAAKSEE AMSYIESQSS VLLKHLDEIL QTGYPENGNH  840
DVASSSQAIS FVGNHPDHTT QARAVAHTAN GLTSLLGISA YPESSGQLKG SVGSLYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-83FAR1 family protein