PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 903aa    MW: 99323.5 Da    PI: 7.4682
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.73e-21103204190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgk 75 
                        +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + 
  TRIDC2BG035380.14 103 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANA 189
                        6*****************99997666.****************999955550....24455556666668899*************99899* PP

               FAR1  76 wevtkleleHnHela 90 
                        ++vt+++ eHnH+la
  TRIDC2BG035380.14 190 FRVTEFVAEHNHPLA 204
                        *************97 PP
2FAR169.86.3e-22252351290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                        fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k
  TRIDC2BG035380.14 252 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAK 341
                        9*************9976655..9******************9999******99999977777778899*********************** PP

               FAR1  81 leleHnHela 90 
                        +  eHnH+la
  TRIDC2BG035380.14 342 FIAEHNHPLA 351
                        ********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 903 aa     Download sequence    
STANPSNLFF LLPLLPPSFL QTLAQTLMST TAHPPASLSG DSSPTTSGSS SPSSSAFVAG  60
SDEPALLGPA TSTSTPSAAG DDAAVPSSPQ MGMYFETEDD AYEFYKVYAA RLGFVVRKSN  120
KSKNSRHTVT RRLFVCSKQG FRQEPKKPQD ETNATDVTVA APPPPPRCPD SRTGCLASLT  180
IKLLPSANAF RVTEFVAEHN HPLASAVSAV SLAMIPSSSS HHTIAAAASL PDPRDGPLPE  240
MHFETEDDAY AFYNRYAEHV GFSVRRSYKK RKHGVIVSRI FVCSREGVSD RAKHDGLASI  300
STNAGGGAPG TPRPGPPPTR TGCQARMVIK ITPCRTYRVA KFIAEHNHPL ANSETVHKLR  360
SHKMRARGHE LGAGELHRRK QGKGVQLGDA GAALEYLEGL QVGNPSLYYA VGMAPDGNSA  420
VNFFWADAKS IIDFRSFGDV VCFDTTYGLN VYGRPFALFV GVDNHKQLLV FGAALLYDDG  480
IQSLKWVFQA FADAMRDRQP KTILIDERSE CAIAAAEVWP GSNHCTSVWH IYHSSKRHLK  540
QVFESSKSFG NALSQCLFDC EDEMEFLSAW EKLIEKHDIG ESEWLSRLFL EKEKWALPYR  600
RTVFSADILS TLRKDSMINE LKRELSEQED ILLFFKRYET MLEEHRSKKL QADVDGNQVT  660
LPIPSLRMLK QSSNAYTPEA FKMFQGEFEA YMNCMSFPCS AVGTVSEYKI TLDEKPSEGI  720
VKFDALDGLA TCSCRKFESV GIQCCHVLKV LDLKNIKELP EQYILKRWRK DARSVRMGEE  780
PNCGSSSIMR SSLDVRFSNM CRMVSLIASR AAKSEEAMSY IESQSSVLLK HLDEILQTGY  840
PENGNHDVAS SSQAISFVGN HPDHTTQARA VAHTANGLTS LLGISAYPES SGQLKGSVGS  900
LYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-83FAR1 family protein