PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035380.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 918aa    MW: 101214 Da    PI: 7.5681
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035380.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.73e-21104205190
               FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerr............traetrtgCkaklkvkkek.dgk 75 
                        +fY+ YA ++GF vrks+++k++r++ +t+r fvCsk+g+r+e kk     +                 + + +rtgC a+l++k+    + 
  TRIDC2BG035380.12 104 EFYKVYAARLGFVVRKSNKSKNSRHT-VTRRLFVCSKQGFRQEPKKPqdetN----AtdvtvaapppppRCPDSRTGCLASLTIKLLPsANA 190
                        6*****************99997666.****************999955550....24455556666668899*************99899* PP

               FAR1  76 wevtkleleHnHela 90 
                        ++vt+++ eHnH+la
  TRIDC2BG035380.12 191 FRVTEFVAEHNHPLA 205
                        *************97 PP
2FAR169.86.5e-22253352290
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.............tekerrtraetrtgCkaklkvkkekdgkwevtk 80 
                        fYn+YA++vGFsvr+s++k++  +g i++r fvCs+eg +++ k++               + r   + trtgC+a++++k +   +++v+k
  TRIDC2BG035380.12 253 FYNRYAEHVGFSVRRSYKKRK--HGVIVSRIFVCSREGVSDRAKHDglasistnagggaPGTPRPGPPPTRTGCQARMVIKITPCRTYRVAK 342
                        9*************9976655..9******************9999******99999977777778899*********************** PP

               FAR1  81 leleHnHela 90 
                        +  eHnH+la
  TRIDC2BG035380.12 343 FIAEHNHPLA 352
                        ********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 918 aa     Download sequence    
ASTANPSNLF FLLPLLPPSF LQTLAQTLMS TTAHPPASLS GDSSPTTSGS SSPSSSAFVA  60
GSDEPALLGP ATSTSTPSAA GDDAAVPSSP QMGMYFETED DAYEFYKVYA ARLGFVVRKS  120
NKSKNSRHTV TRRLFVCSKQ GFRQEPKKPQ DETNATDVTV AAPPPPPRCP DSRTGCLASL  180
TIKLLPSANA FRVTEFVAEH NHPLASAVSA VSLAMIPSSS SHHTIAAAAS LPDPRDGPLP  240
EMHFETEDDA YAFYNRYAEH VGFSVRRSYK KRKHGVIVSR IFVCSREGVS DRAKHDGLAS  300
ISTNAGGGAP GTPRPGPPPT RTGCQARMVI KITPCRTYRV AKFIAEHNHP LANSETVHKL  360
RSHKMRARGH ELGAGELHRR KQGKGVQLGD AGAALEYLEG LQVGNPSLYY AVGMAPDGNS  420
AVNFFWADAK SIIDFRSFGD VVCFDTTYGL NVYGRPFALF VGVDNHKQLL VFGAALLYDD  480
GIQSLKWVFQ AFADAMRDRQ PKTILIDERS ECAIAAAEVW PGSNHCTSVW HIYHSSKRHL  540
KQVFESSKSF GNALSQCLFD CEDEMEFLSA WEKLIEKHDI GESEWLSRLF LEKEKWALPY  600
RRTVFSADIL STLRKDSMIN ELKRELSEQE DILLFFKRYE TMLEEHRSKK LQADVDGNQV  660
TLPIPSLRML KQSSNAYTPE AFKMFQGEFE AYMNCMSFPC SAVGTVSEYK ITLDEKPSEG  720
IVKFDALDGL ATCSCRKFES VGIQCCHVLK VLDLKNIKEL PEQYILKRWR KDARSVRMGE  780
EPNCGSSSIM RSSLDVRFSN MCRMVSLIAS RAAKSEEAMS YIESQSSVLL KHLDEILQTG  840
YPENGNHDVA SSSQAISFVG NHPDHTTQAR AVAHTANGLT SLLGISAYPE SSGQLKVLIC  900
CHVDVSKYIL KTLLFPIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-83FAR1 family protein