PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG035110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CAMTA
Protein Properties Length: 324aa    MW: 36312.2 Da    PI: 6.1511
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG035110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1168.51e-52341484117
              CG-1   4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 
                       e  +rw +++ei+a+L+n+e++++++++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdgktv+E+hekLK+g+ e +++yYa++e+np+f 
  TRIDC2BG035110.1  34 EaASRWFRPNEIYAVLANHERFKVHAQPIDKPVSGAIVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEERVHVYYARGEDNPNFF 126
                       4489***************************************************************************************** PP

              CG-1  96 rrcywlLeeelekivlvhylev 117
                       rrcywlL++e e+ivlvhy+++
  TRIDC2BG035110.1 127 RRCYWLLDKEAERIVLVHYRQT 148
                       *******************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MAGAAGRERD PLLRSEIHGF ITYADLNFEK LKAEAASRWF RPNEIYAVLA NHERFKVHAQ  60
PIDKPVSGAI VLYDRKVVRN FRKDGHNWKK KKDGKTVQEA HEKLKIGNEE RVHVYYARGE  120
DNPNFFRRCY WLLDKEAERI VLVHYRQTSE ENAIAHPSTE AEAEAPTMNV IQYYTSPPIS  180
ANSASVHTEI SFSPPAPEEI NSHGGSAISS DTGGSSLEEF WVHLLESSMK KDTACGASVA  240
FSQQIKCGMK DSGNDTDSTN NVHANHAGAL EHQLDQSQYP LTSDLDSQSQ QFATSLRRTP  300
VDGDIPNDVP ARENSLGLWK YLDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16940.11e-61CAMTA family protein