PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG034590.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 304aa MW: 32525.3 Da PI: 4.6425

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG034590.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	71	1.4e-22	215	255	1	41
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrk 41 ++epgrCrRtDGKkWRC+r++++++k+CErH+hrgr+r + TRIDC2BG034590.1 215 EPEPGRCRRTDGKKWRCWRKTIPNEKYCERHMHRGRKRPVQ 255 69***********************************9765 PP
2	QLQ	53.9	5.6e-19	149	184	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Qlq+L++Q +y+y+aa++PvP +L+++i+k TRIDC2BG034590.1 149 SFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPIWK 184 8*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
TTLGPSPPSP SKRELRIAGL PLRSNPKDTF CPLLLRGPFA TMAAEGEDKK DANSVGGGGG 60 ENTLESAEEA ILQAVGQEPG QELEGEAEES ADREGNGDDA GKEDSGCKDL VLVEDPVLLE 120 DPEEAVATAA LQEEMRALLA SVPEGAGASF TAMQLQELEQ QSRVYQYMAA RVPVPTHLVF 180 PIWKSVTGAS SEGAQNYPTL MGLATLCLDF GKSPEPEPGR CRRTDGKKWR CWRKTIPNEK 240 YCERHMHRGR KRPVQVIVED DEPDSASGSK SSSGKVTEGG KKTDDKSSSS KKLAVAAPAA 300 VEFT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-30	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG034590.1