PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG034360.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 242aa MW: 26705.3 Da PI: 9.9577 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.5 | 2.6e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G +W+++++ g+ R++k+c++rw +yl TRIDC2BG034360.2 13 RGLWSPEEDERLLRYITAHGHSCWSAVPKNAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.9 | 3.7e-16 | 66 | 109 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E+ ++d+++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC2BG034360.2 66 RGTFSEQEERTILDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGHQCCSKQK VKRGLWSPEE DERLLRYITA HGHSCWSAVP KNAGLQRCGK SCRLRWINYL 60 RPDLKRGTFS EQEERTILDV HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLIAQGL 120 DPKTHNLLPA SKHLLHAHGG TGSGSNPSNN PAARAQFHSP NGNGNGCATP PFTISSPTKA 180 VYDAATVASP VVAPGLYDVH NPGMMMGQHE RCQQAAIAMQ QGYPYVHNNG GGLLMNFRDQ 240 NA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 5e-84 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG034360.2 |