PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG034150.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 192aa MW: 20129.4 Da PI: 10.4695

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG034150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.3	7.8e-42	86	162	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 Cq+e+C adlseak+yhrrhkvCe+hska+vv+v+gl+qrfCqqCsrfhel efD++krsCrrrLa+hnerrrk++a TRIDC2BG034150.1 86 CQAERCGADLSEAKRYHRRHKVCEAHSKAAVVVVAGLRQRFCQQCSRFHELLEFDDQKRSCRRRLAGHNERRRKSSA 162 **************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MDRKDKSRKS SSAASMAALA AAAAAGDVAR ADGMSGEEDQ KLKLVNVPVV SVGGSSSSAA 60 AVAVRRGSGA AGAVATGAAG AGGPSCQAER CGADLSEAKR YHRRHKVCEA HSKAAVVVVA 120 GLRQRFCQQC SRFHELLEFD DQKRSCRRRL AGHNERRRKS SAEANGGDGC RHADQDGRSH 180 PGNPPLNHFQ IR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	6e-40	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG034150.1