PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG031190.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 347aa MW: 38384.3 Da PI: 6.5039

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG031190.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58	2.2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv ++k++G g+W+t ++ + R++k+c++rw +yl TRIDC2BG031190.1 14 KGPWTQEEDEKLVAYIKKHGQGNWRTLPKNADLERCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.6	2.6e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ TRIDC2BG031190.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGRAPCCDRT GLKKGPWTQE EDEKLVAYIK KHGQGNWRTL PKNADLERCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHAPRL DLLDLSSLLK PAAYYPTQAD LDTLRALEPL ANYPDLLRLA STLLSAPTTT 180 SSQPTTEQHM LLPWLIQAQM AQQVSQAPPQ HATAADMFLQ PSSACQMPGL VHANPAQQLH 240 QDHMVASDYG QLPGYDNQLD YVPGLMQMAS DTSNLQWSSP VTSSNNNNNC NVGSGVSTPS 300 SSPAGRVNLA STTAFCANAS NIDALIADAD GLFDMHLSDL LDVSDYM

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGRAPCCDRT GLKKGPWTQE EDEKLVAYIK KHGQGNWRTL PKNADLERCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHAPRL DLLDLSSLLK PAAYYPTQAD LDTLRALEPL ANYPDLLRLA STLLSAPTTT  180
SSQPTTEQHM LLPWLIQAQM AQQVSQAPPQ HATAADMFLQ PSSACQMPGL VHANPAQQLH  240
QDHMVASDYG QLPGYDNQLD YVPGLMQMAS DTSNLQWSSP VTSSNNNNNC NVGSGVSTPS  300
SSPAGRVNLA STTAFCANAS NIDALIADAD GLFDMHLSDL LDVSDYM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	3e-86	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG031190.1